| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | AAACTGTAGG (2) CCTTTAATCC (3) GCTCTGGCTG GGGATGGAGG (3) GGGGATGGGC TACAGAAGCA TCATTATTGA (3)
| 63.5 | 0.0635 |
| Cb medulloblastoma | CCTTTAATCC (3) GCTCTGGCTG GGGGTGGAGG (2) TCATTATTGA (3)
| 69.3 | 0.0693 |
| P8 GC+1d culture | CAATGGCTTC CCTTTAATCC (3) GCTCTGGCTG GGGATGGAGG (3) GGGGATGGGC TCATTATTGA (3) TGTATGCAAA (2)
| 50.1 | 0.0501 |
| P8 GC+SHH+1d culture | CCTTTAATCC (3) GCTCTGGCTG GGCCTTGAAA GGGGATGGGC GGGGTGGAGG (2) GGTAGTTTGC GTGGCACATA TCATTATTGA (3)
| 45.7 | 0.0457 |
| 3T3 fibroblasts | CCTTTAATCC (3) GGGATGGAGG (3) GGGGATGGGC GTGGCACATA TCTGTCCACT
| 84.1 | 0.0841 |
| E15 cortex | CCTTTAATCC (3) GCTCTGGCTG GTGGCACATA
| 69.2 | 0.0692 |
| P1 cortex | CCTTTAATCC (3) GCTCTGGCTG TTTTCTTTGG (3)
| 163.5 | 0.1635 |
| Hypothalamus | AAACTGTAGG (2) CCTTTAATCC (3) GCCTTTGAAT (2) GCTCTGGCTG TCATTATTGA (3) TGTATGCAAA (2) TTAAGTGAGT TTTGGTATTG
| 56.1 | 0.0561 |
| E12.5 retina | CCTTTAATCC (3) GCTCTGGCTG GGGATGGAGG (3) TTAAGTGAGT TTTTCTTTGG (3)
| 90.2 | 0.0902 |
| E14.5 retina | CCTTTAATCC (3) GCTCTGGCTG GTGGCACATA TCATTATTGA (3)
| 127.5 | 0.1275 |
| E16.5 retina | AAACTGTAGG (2) CCTTTAATCC (3) GCTCTGGCTG GGCCTTGAAA GTGGCACATA TCATTATTGA (3)
| 95.9 | 0.0959 |
| E18.5 retina | CCTTTAATCC (3) GCTCTGGCTG TTAAGTGAGT TTTTCTTTGG (3)
| 36.3 | 0.0363 |
| P0.5 retina | CCTTTAATCC (3) GCTCTGGCTG
| 96.2 | 0.0962 |
| P2.5 retina | AAACTGTAGG (2) CCTTTAATCC (3) GCTCTGGCTG GGGATGGAGG (3) TCATTATTGA (3) TGTATGCAAA (2) TTTTCTTTGG (3)
| 107.5 | 0.1075 |
| P4.5 retina | AAACTGTAGG (2) CCTTTAATCC (3) GCTCTGGCTG GGGGATGGGC TCATTATTGA (3) TTTGGTATTG
| 63.5 | 0.0635 |
| P6.5 retina | AAACTGTAGG (2) CAATGGCTTC CCTTTAATCC (3) GCTCTGGCTG GGCCTTGAAA GGGATGGAGG (3) GGGGTGGAGG (2) GTGGCACATA TCATTATTGA (3) TTTGGTATTG
| 106.9 | 0.1069 |
| P10.5 crx- retina | AAACTGTAGG (2) CCTTTAATCC (3) GCTCTGGCTG GGGATGGAGG (3) TCATTATTGA (3)
| 89.3 | 0.0893 |
| P10.5 crx+ retina | CAATGGCTTC CCTTTAATCC (3) GCTCTGGCTG GGGGATGGGC GGTAGTTTGC GTGGCACATA TTAAGTGAGT
| 61.3 | 0.0613 |
| Adult retinal | AAACTGTAGG (2) CCTTTAATCC (3) GCCTTTGAAT (2) GCTCTGGCTG GGGATGGAGG (3) GTGGCACATA TACAGAAGCA TCATTATTGA (3) TCTGTCCACT TTTTCTTTGG (3)
| 159.5 | 0.1595 |
| ONL | AAACTGTAGG (2) CCTTTAATCC (3) GCTCTGGCTG GGGATGGAGG (3) GGGGTGGAGG (2) GTGGCACATA TCATTATTGA (3) TCTGTCCACT
| 107.1 | 0.1071 |