Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.306162	Lsm7	LSM7 homolog, U6 small nuclear RNA associated (S. cerevisiae)	10		66094
Gene Ontology	cytoplasm | mRNA catabolism | protein heterodimerization activity
Human Homolog	LSM7[LSM7 homolog, U6 small nuclear RNA associated (S. cerevisiae)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 114 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GAGCCCTTCC (2) GTCCCATCCA (2) TGAAAAAAAA (2) TGAGCAAAAA TGAGCATCAA (2) TGAGCATCTC 58.6 0.0586 Cb medulloblastoma GAGCCCTTCC (2) TGAAAAAAAA (2) TGAGCAAAAA TGAGCATCAA (2) TGAGCATCTC 113.2 0.1132 P8 GC+1d culture GAGCCCTTCC (2) TGAAAAAAAA (2) TGAGCAAAAA TGAGCAAAGA TGAGCATCAA (2) TGAGCATCTC 45.6 0.0456 P8 GC+SHH+1d culture GTCCCATCCA (2) TGAAAAAAAA (2) TGAGCAAAAA TGAGCATCAA (2) TGAGCATCTC 89 0.089 3T3 fibroblasts TGAAAAAAAA (2) TGAGCAAAAA TGAGCATCTC 21 0.021 E15 cortex TGAAAAAAAA (2) TGAGCAAAAA TGAGCATCAA (2) TGAGCATCTC 44.4 0.0444 P1 cortex TGAAAAAAAA (2) TGAGCAAAAA TGAGCATCTC 13.5 0.0135 Hypothalamus AGGAGGTGAG GAGGCCATCC (2) TGAAAAAAAA (2) TGAGCAAAAA TGAGCATCAA (2) TGAGCATCTC 63.3 0.0633 E12.5 retina GAGCCCTTCC (2) GAGGCCATCC (2) TGAAAAAAAA (2) TGAGCAAAAA TGAGCATCAA (2) TGAGCATCTC 67.6 0.0676 E14.5 retina AGGAGGTGAG GAGCCCTTCC (2) GAGGCCATCC (2) GTCCCATCCA (2) TGAAAAAAAA (2) TGAGCAAAAA TGAGCATCAA (2) TGAGCATCTC 85.5 0.0855 E16.5 retina AGGAGGTGAG GAGCCCTTCC (2) TGAAAAAAAA (2) TGAGCAAAAA TGAGCATCAA (2) TGAGCATCTC 58 0.058 E18.5 retina GAGCCCTTCC (2) TGAAAAAAAA (2) TGAGCAAAAA TGAGCATCAA (2) TGAGCATCTC 123.6 0.1236 P0.5 retina GAGCCCTTCC (2) TGAAAAAAAA (2) TGAGCAAAAA TGAGCATCAA (2) TGAGCATCTC 43.3 0.0433 P2.5 retina GAGCCCTTCC (2) GAGGCCATCC (2) GTCCCATCCA (2) TGAAAAAAAA (2) TGAGCAAAAA TGAGCAAAGA TGAGCATCAA (2) TGAGCATCTC 93.3 0.0933 P4.5 retina GAGCCCTTCC (2) TGAAAAAAAA (2) TGAGCAAAAA TGAGCAAAGA TGAGCATCAA (2) TGAGCATCTC 69.4 0.0694 P6.5 retina GAGCCCTTCC (2) GAGGCCATCC (2) TGAAAAAAAA (2) TGAGCAAAAA TGAGCAAAGA TGAGCATCAA (2) TGAGCATCTC 65 0.065 P10.5 crx- retina AGGAGGTGAG GAGCCCTTCC (2) GTCCCATCCA (2) TGAAAAAAAA (2) TGAGCAAAAA TGAGCATCAA (2) TGAGCATCTC 28.1 0.0281 P10.5 crx+ retina GTCCCATCCA (2) TGAAAAAAAA (2) TGAGCAAAAA TGAGCAAAGA TGAGCATCAA (2) TGAGCATCTC 40.3 0.0403 Adult retinal GAGCCCTTCC (2) TGAAAAAAAA (2) TGAGCAAAAA TGAGCATCAA (2) TGAGCATCTC 22.4 0.0224 ONL GAGCCCTTCC (2) GAGGCCATCC (2) TGAAAAAAAA (2) TGAGCAAAAA TGAGCAAAGA TGAGCATCAA (2) TGAGCATCTC 42.1 0.0421