| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | AGGCCAGGAG TGGAAGGACC TTCCTGAGGC (2)
| 13 | 0.013 |
| Cb medulloblastoma | GCCCTGTCTG (2) TGGAAGGACC
| 6.9 | 0.0069 |
| P8 GC+1d culture | GCCCTGTCTG (2) TGGAAGGACC TTCCTGAGGC (2)
| 26.2 | 0.0262 |
| P8 GC+SHH+1d culture | AGGCCAGGAG GCCCTAGAGG GCCCTGTCTG (2) GCGCGCACAT TGGAAGGACC TTCCTGAGGC (2)
| 23.4 | 0.0234 |
| 3T3 fibroblasts | GTGGGAGGCC TGGAAGGACC TTCCTGAGGC (2)
| 24.5 | 0.0245 |
| E15 cortex | TGGAAGGACC TTCCTGAGGC (2)
| 34.6 | 0.0346 |
| P1 cortex | TGGAAGGACC TTCCTGAGGC (2)
| 9 | 0.009 |
| Hypothalamus | TTCCTGAGGC (2)
| 1.8 | 0.0018 |
| E12.5 retina | AGGCCAGGAG CTTTTGCGAA TGGAAGGACC TTCCTGAGGC (2)
| 18.8 | 0.0188 |
| E14.5 retina | AGGCCAGGAG CCCCTTGCCC CTTTTGCGAA TGGAAGGACC
| 7.2 | 0.0072 |
| E16.5 retina | CCCCTTGCCC CTTTTGCGAA GCGCGCACAT GTGGGAGGCC TGGAAGGACC TTCCTGAGGC (2)
| 30.7 | 0.0307 |
| E18.5 retina | TGGAAGGACC TTCCTGAGGC (2)
| 10.9 | 0.0109 |
| P0.5 retina | CCCCTTGCCC CTTTTGCGAA GCCCTAGAGG TGGAAGGACC TTCCTGAGGC (2)
| 31.5 | 0.0315 |
| P2.5 retina | GCGCGCACAT TGGAAGGACC TTCCTGAGGC (2)
| 21.1 | 0.0211 |
| P4.5 retina | AGGCCAGGAG GCCCTAGAGG TGGAAGGACC TTCCTGAGGC (2)
| 10 | 0.01 |
| P6.5 retina | CCCCTTGCCC GTGGGAGGCC TGGAAGGACC TTCCTGAGGC (2)
| 21.7 | 0.0217 |
| P10.5 crx- retina | AGGCCAGGAG TGGAAGGACC TTCCTGAGGC (2)
| 18.6 | 0.0186 |
| P10.5 crx+ retina | TGGAAGGACC TTCCTGAGGC (2)
| 7.6 | 0.0076 |
| Adult retinal | TGGAAGGACC TTCCTGAGGC (2)
| 22.2 | 0.0222 |
| ONL | AGGCCAGGAG TGGAAGGACC TTCCTGAGGC (2)
| 17.2 | 0.0172 |