Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.30805
Hemp1
hematopoietic protein 1
15
105855
Human Homolog
HEM1[hematopoietic protein 1]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 39 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
CTGAGTCTGT
GGGCCAGGCT (
2
)
TGCTGCACGT
13
0.013
Cb medulloblastoma
CTGAAAGGAA (
2
)
TGCTGCACGT
27.7
0.0277
P8 GC+1d culture
CTGAAAGGAA (
2
)
GGCCTCTCCG
GGGCCAGGCT (
2
)
TGCTGCACGT
33.1
0.0331
P8 GC+SHH+1d culture
GGCCTCTCCG
TGCTGCACGT
23.4
0.0234
3T3 fibroblasts
CTGAGTCTGT
GTCATAGCTG (
2
)
14
0.014
E15 cortex
GTCATAGCTG (
2
)
TGCTGCACGT
29.6
0.0296
P1 cortex
TGCTGCACGT
22.7
0.0227
Hypothalamus
TGCTGCACGT
9.1
0.0091
E12.5 retina
CTGAAAGGAA (
2
)
CTGAGTCTGT
5.7
0.0057
E14.5 retina
TGCTGCACGT
9.1
0.0091
E16.5 retina
CTGAAAGGAA (
2
)
TGCTGCACGT
19.9
0.0199
E18.5 retina
TGCTGCACGT
3.6
0.0036
P0.5 retina
CTGAAAGGAA (
2
)
GTCATAGCTG (
2
)
TGCTGCACGT
15.7
0.0157
P2.5 retina
GTCATAGCTG (
2
)
TGCTGCACGT
8.8
0.0088
P4.5 retina
GTCATAGCTG (
2
)
TGCTGCACGT
6
0.006
P6.5 retina
GTCATAGCTG (
2
)
TGCTGCACGT
11.6
0.0116
P10.5 crx- retina
GGGCCAGGCT (
2
)
TGCTGCACGT
46.5
0.0465
P10.5 crx+ retina
TGCTGCACGT
17.3
0.0173
Adult retinal
GTCATAGCTG (
2
)
TGCTGCACGT
22.3
0.0223
ONL
GTCATAGCTG (
2
)
TGCTGCACGT
9.5
0.0095
