Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.32019	Tcp1	t-complex protein 1	17	17 7.5 cM	21454
Gene Ontology	ATP binding | microtubule organizing center | nuclear heterochromatin | pericentriolar material | protein folding
Human Homolog	TCP1[t-complex 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 110 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CCCAAGAGAA (2) CCTGCAAGGA CCTTTAATCC (3) GACCAAATCA (2) GGAAACCACG (2) GGAGAAGTCA (2) 70.1 0.0701 Cb medulloblastoma CCTGCAAGGA CCTTTAATCC (3) GACAAAATAA (3) TGTAATGAAA (2) 57.8 0.0578 P8 GC+1d culture AGCTCAGTGA ATGCTCTTTG (2) ATGCTGCCAG CAGTTCACCC (2) CCTGCAAGGA CCTTTAATCC (3) GCTGCAGCTT GGAAACCACG (2) TTATTTTGTG (2) 64.9 0.0649 P8 GC+SHH+1d culture ATGCTCTTTG (2) ATGCTGCCAG CAGTTCACCC (2) CCCAAAAAAA (2) CCCAAGAGAA (2) CCTGCAAGGA CCTTTAATCC (3) GACAAAATAA (3) GACCAAATCA (2) GGAAACCACG (2) TGTAATGAAA (2) 65.6 0.0656 3T3 fibroblasts CAGTTCACCC (2) CCTGCAAGGA CCTTTAATCC (3) GGAAACCACG (2) 119.1 0.1191 E15 cortex CCCAAAAAAA (2) CCCAAGAGAA (2) CCTGCAAGGA CCTTTAATCC (3) GGAAACCACG (2) 93.8 0.0938 P1 cortex CAGTTCACCC (2) CCTTTAATCC (3) GGAAACCACG (2) 168.1 0.1681 Hypothalamus CCTGCAAGGA CCTTTAATCC (3) GGAAACCACG (2) TGTAATGAAA (2) 27.1 0.0271 E12.5 retina AGCTCAGTGA CAGTTCACCC (2) CCTGCAAGGA CCTTTAATCC (3) GGAAACCACG (2) 95.8 0.0958 E14.5 retina CAGTTCACCC (2) CCCAAGAGAA (2) CCTGCAAGGA CCTTTAATCC (3) GAAGACAAAG (2) GCTGCAGCTT GGAAACCACG (2) GGAGAAGTCA (2) 136.6 0.1366 E16.5 retina CAGTTCACCC (2) CCCAAAAAAA (2) CCCAAGAGAA (2) CCTGCAAGGA CCTTTAATCC (3) GAAGACAAAG (2) GGAAACCACG (2) 106.7 0.1067 E18.5 retina CCCAAAAAAA (2) CCTGCAAGGA CCTTTAATCC (3) GGAAACCACG (2) 34.5 0.0345 P0.5 retina CAGTTCACCC (2) CCCAAAAAAA (2) CCTGCAAGGA CCTTTAATCC (3) GGAAACCACG (2) 100.2 0.1002 P2.5 retina ATGCTGCCAG CCCAAAAAAA (2) CCCAAGAGAA (2) CCTGCAAGGA CCTTTAATCC (3) CTGATCAATG GACCAAATCA (2) GCTGCAGCTT 95.2 0.0952 P4.5 retina CCCAAAAAAA (2) CCTGCAAGGA CCTTTAATCC (3) CTGATCAATG GGAAACCACG (2) 73.3 0.0733 P6.5 retina AGCTCAGTGA CCCAAAAAAA (2) CCTGCAAGGA CCTTTAATCC (3) GGAAACCACG (2) 93.4 0.0934 P10.5 crx- retina CCTGCAAGGA CCTTTAATCC (3) GGAAACCACG (2) TTATTTTGTG (2) 87.3 0.0873 P10.5 crx+ retina AGCTCAGTGA CCTGCAAGGA CCTTTAATCC (3) GGAAACCACG (2) 65.3 0.0653 Adult retinal CAGTTCACCC (2) CCCAAAAAAA (2) CCTGCAAGGA CCTTTAATCC (3) GGAAACCACG (2) 144.5 0.1445 ONL CCCAAAAAAA (2) CCTTTAATCC (3) GGAAACCACG (2) GGAGAAGTCA (2) 99.6 0.0996