Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.32912	Psmb1	proteasome (prosome, macropain) subunit, beta type 1	17	17 8.25 cM	19170
Gene Ontology	cytosol | endopeptidase activity | hydrolase activity | peptidase activity | proteasome core complex (sensu Eukarya) | ubiquitin-dependent protein catabolism
Human Homolog	PSMB1[proteasome (prosome, macropain) subunit, beta type, 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 103 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AGGCTGGTGA AGTGTGAGGA CAAATACCCA CCACCACTGG CGGGTCATAT CTGCAGCCTC CTGCAGGCCT GCACTTGCTG TAAGGCCCTG (4) 52.1 0.0521 Cb medulloblastoma CAAATACCCA CCACCACTGG CGGGTCATAT CTGCAGGCCT TTTGTTTTAT (2) 64.7 0.0647 P8 GC+1d culture AGCTGGTGAA (2) AGGCTGGTGA CAAATACCCA CCACCACTGG CGGGTCATAT CTGCAGCCTC CTGCAGGCCT 42.1 0.0421 P8 GC+SHH+1d culture AGGCTGGTGA AGTGTGAGGA CAAATACCCA CCACCACTGG CGGGTCATAT CTGCAGGCCT TTTGTTTTAT (2) 48 0.048 3T3 fibroblasts CGGGTCATAT CTGGCAGCCT (3) 24.5 0.0245 E15 cortex CGGGTCATAT CTGGCAGCCT (3) 9.8 0.0098 P1 cortex CCACCACTGG CGGGTCATAT CTGCAGGCCT 18.1 0.0181 Hypothalamus AGGCTGGTGA CAAATACCCA CCACCACTGG CGGGTCATAT CTGCAGGCCT GGACAGTTGT (2) TAAGGCCCTG (4) TTTGTTTTAT (2) 77.8 0.0778 E12.5 retina CAAATACCCA CGGGTCATAT CTGGCAGCCT (3) 52.6 0.0526 E14.5 retina AGCTGGTGAA (2) CAAATACCCA CCACCACTGG CGGGTCATAT CTGGCAGCCT (3) GCACTTGCTG GGGCTGGTGA (3) GGTCTGTCCA (3) TTTGTTTTAT (2) 36.2 0.0362 E16.5 retina ATGCAGAGTG CAAATACCCA CGGGTCATAT CTGCAGCCTC GGGCTGGTGA (3) TTTGTTTTAT (2) 34.3 0.0343 E18.5 retina AGTGTGAGGA CAAATACCCA CGGGTCATAT GGACAGTTGT (2) TTTGTTTTAT (2) 78.1 0.0781 P0.5 retina CAAATACCCA CGGGTCATAT 17.6 0.0176 P2.5 retina AGTGTGAGGA CAAATACCCA CGGGTCATAT GGGCTGGTGA (3) 52.8 0.0528 P4.5 retina AGTGTGAGGA CAAATACCCA CGGGTCATAT CTGCAGCCTC 53.5 0.0535 P6.5 retina AGTGTGAGGA CAAATACCCA CCACCACTGG CGGGTCATAT 35.1 0.0351 P10.5 crx- retina ATGCAGAGTG CAAATACCCA CCACCACTGG CGGGTCATAT GGGCTGGTGA (3) 61.3 0.0613 P10.5 crx+ retina AGTGTGAGGA CAAATACCCA CCACCACTGG CGGGTCATAT CTGCAGCCTC CTGCAGGCCT CTGGCAGCCT (3) GCACTTGCTG TAAGGCCCTG (4) TTTGTTTTAT (2) 72.9 0.0729 Adult retinal CAAATACCCA CGGGTCATAT CTGGCAGCCT (3) TAAGGCCCTG (4) 26.1 0.0261 ONL AGTGTGAGGA CAAATACCCA CGGGTCATAT GGTCTGTCCA (3) 19.1 0.0191