Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.33027
Iqsec2
IQ motif and Sec7 domain 2
X
245666
Human Homolog
IQSEC2[IQ motif and Sec7 domain 2]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 40 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
GGTGTTGCTA
TTTTTTTTTT (
2
)
6.5
0.0065
Cb medulloblastoma
GCTGGCAGGC
GGTGTTGCTA
TGTGTTGCTA
TTTTTTTTTT (
2
)
13.8
0.0138
P8 GC+1d culture
GCTGGCAGGC
TTTTTTTTTT (
2
)
14.8
0.0148
P8 GC+SHH+1d culture
GGTGTTGCTA
TGTGTTGCTA
TTTTTTTTTT (
2
)
9.4
0.0094
E15 cortex
CCCCCCTTCC
TTTTTTTTTT (
2
)
9.8
0.0098
P1 cortex
TTTTTTTTTT (
2
)
4.5
0.0045
Hypothalamus
TGTGTTGCTA
TTTTTTTTTT (
2
)
16.3
0.0163
E12.5 retina
GGTGTTGCTA
TTTTTTTTTT (
2
)
18.8
0.0188
E14.5 retina
TTTTTTTTTT (
2
)
23.7
0.0237
E16.5 retina
GGTGTTGCTA
TTTTTTTTTT (
2
)
7.2
0.0072
E18.5 retina
TTTTTTTTTT (
2
)
10.9
0.0109
P0.5 retina
TTTTTTTTTT (
2
)
9.8
0.0098
P2.5 retina
CCCCCCTTCC
GGTGTTGCTA
TTTTTTTTTT (
2
)
19.3
0.0193
P4.5 retina
GGTGTTGCTA
TTTTTTTTTT (
2
)
11.9
0.0119
P6.5 retina
GCTGGCAGGC
GGTGTTGCTA
TTTTTTTTTT (
2
)
16.6
0.0166
P10.5 crx- retina
GCTGGCAGGC
GGTGTTGCTA
TGTGTTGCTA
5.7
0.0057
P10.5 crx+ retina
GCTGGCAGGC
GGTGTTGCTA
TTTTTTTTTT (
2
)
21.1
0.0211
Adult retinal
TTTTTTTTTT (
2
)
7.4
0.0074
ONL
GCTGGCAGGC
TTTTTTTTTT (
2
)
7.6
0.0076
