Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.330677	Asxl1	additional sex combs like 1 (Drosophila)	2		228790
Gene Ontology	DNA binding | nucleus | regulation of transcription, DNA-dependent
Human Homolog	ASXL1[additional sex combs like 1 (Drosophila)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 136 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAAAAGAAAA AGATGCAAGT CAGCCTGAAA (2) CTGTCTGTAG GCCATTGGAA (2) GGGCTGCTCA (3) TAAAAAAAAA (3) TTTTTTAACA (2) 83.2 0.0832 Cb medulloblastoma AAAAAGAAAA CAGCCTGAAA (2) GCCATTGGAA (2) GGGCTGCTCA (3) TAAAAAAAAA (3) TTTTTTAACA (2) 145.6 0.1456 P8 GC+1d culture AAAAAGAAAA ATGACTGCAT CAGCCTGAAA (2) CTGTCTGTAG GCCATTGGAA (2) GGGCTGCTCA (3) TAAAAAAAAA (3) TGCTCTGGAT TTTTTTAACA (2) 94.6 0.0946 P8 GC+SHH+1d culture AAAAAGAAAA CAGCCTGAAA (2) GCCATTGGAA (2) GGGCTGCTCA (3) TAAAAAAAAA (3) TGCTCTGGAT TTTTTTAACA (2) 135.8 0.1358 3T3 fibroblasts CAGCCTGAAA (2) GGATCATTGA GGGCTGCTCA (3) TAAAAAAAAA (3) 21 0.021 E15 cortex ATGACTGCAT GGATCATTGA GGGCTGCTCA (3) TAAAAAAAAA (3) 44.4 0.0444 P1 cortex AGATGCAAGT CTGTCTGTAG GCCATTGGAA (2) GGGCTGCTCA (3) GTTCCATCAA TAAAAAAAAA (3) TGCTCTGGAT 81.6 0.0816 Hypothalamus CAGCCTGAAA (2) GCCATTGGAA (2) GGATCATTGA GGGCTGCTCA (3) TAAAAAAAAA (3) 50.7 0.0507 E12.5 retina CAGCCTGAAA (2) CTGTCTGTAG CTTGGCTCCT GCCATTGGAA (2) GGGCTGCTCA (3) TAAAAAAAAA (3) TTTTTTAACA (2) 77.1 0.0771 E14.5 retina ATGACTGCAT CAGCCTGAAA (2) CTGTCTGTAG GCCATTGGAA (2) GGGCTGCTCA (3) TAAAAAAAAA (3) 78.4 0.0784 E16.5 retina AAAAAGAAAA ATGACTGCAT CAGCCTGAAA (2) CTGTCTGTAG GACTTGGCCA (2) GCCATTGGAA (2) GGGCTGCTCA (3) TAAAAAAAAA (3) 70.6 0.0706 E18.5 retina CAGCCTGAAA (2) CTGTCTGTAG GCCATTGGAA (2) GGGCTGCTCA (3) TAAAAAAAAA (3) TTTTTTAACA (2) 169.2 0.1692 P0.5 retina AAAAAGAAAA ATGACTGCAT CAGCCTGAAA (2) GCCATTGGAA (2) GGGCTGCTCA (3) GTTCCATCAA TAAAAAAAAA (3) TTTTTTAACA (2) 96.3 0.0963 P2.5 retina AAAAAGAAAA ATGACTGCAT CAGCCTGAAA (2) CTGTCTGTAG GCCATTGGAA (2) GGGCTGCTCA (3) TAAAAAAAAA (3) TTTTTTAACA (2) 110.9 0.1109 P4.5 retina AAAAAGAAAA ATGACTGCAT CAGCCTGAAA (2) CTGTCTGTAG GCCATTGGAA (2) GGATCATTGA GGGCTGCTCA (3) TAAAAAAAAA (3) TGCTCTGGAT TTTTTTAACA (2) 166.6 0.1666 P6.5 retina CAGCCTGAAA (2) GCCATTGGAA (2) GGATCATTGA GGGCTGCTCA (3) TAAAAAAAAA (3) TGCTCTGGAT TTTTTTAACA (2) 90 0.09 P10.5 crx- retina ATGACTGCAT CAGCCTGAAA (2) CTGTCTGTAG CTTGGCTCCT GACTTGGCCA (2) GCCATTGGAA (2) GCTTTGGTCC GGGCTGCTCA (3) TAAAAAAAAA (3) 72.6 0.0726 P10.5 crx+ retina CAGCCTGAAA (2) GACTTGGCCA (2) GCCATTGGAA (2) GGGCTGCTCA (3) TAAAAAAAAA (3) TTTTTTAACA (2) 75 0.075 Adult retinal GCCATTGGAA (2) GCTTTGGTCC GGGCTGCTCA (3) TAAAAAAAAA (3) TGCTCTGGAT TTTTTTAACA (2) 52 0.052 ONL AAAAAGAAAA CAGCCTGAAA (2) TAAAAAAAAA (3) TGCTCTGGAT TTTTTTAACA (2) 42 0.042