Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.330677	Asxl1	additional sex combs like 1 (Drosophila)	2		228790
Gene Ontology	DNA binding | nucleus | regulation of transcription, DNA-dependent
Human Homolog	ASXL1[additional sex combs like 1 (Drosophila)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 136 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TAAAAAAAAA (196) 47.3 0.0473 P8 Cb GC GCCATTGGAA (3) 11.4 0.0114 P8 Cb GC GGGCTGCTCA (7) 9.8 0.0098 P8 Cb GC TTTTTTAACA (3) 4.9 0.0049 P8 Cb GC AGATGCAAGT 3.3 0.0033 P8 Cb GC CTGTCTGTAG (2) 3.3 0.0033 P8 Cb GC AAAAAGAAAA (19) 1.6 0.0016 P8 Cb GC CAGCCTGAAA (6) 1.6 0.0016 Cb medulloblastoma TAAAAAAAAA (196) 106.4 0.1064 Cb medulloblastoma GCCATTGGAA (3) 18.5 0.0185 Cb medulloblastoma CAGCCTGAAA (6) 9.2 0.0092 Cb medulloblastoma GGGCTGCTCA (7) 6.9 0.0069 Cb medulloblastoma AAAAAGAAAA (19) 2.3 0.0023 Cb medulloblastoma TTTTTTAACA (3) 2.3 0.0023 P8 GC+1d culture TAAAAAAAAA (196) 66.2 0.0662 P8 GC+1d culture GCCATTGGAA (3) 9.1 0.0091 P8 GC+1d culture GGGCTGCTCA (7) 9.1 0.0091 P8 GC+1d culture CTGTCTGTAG (2) 2.3 0.0023 P8 GC+1d culture TGCTCTGGAT (2) 2.3 0.0023 P8 GC+1d culture TTTTTTAACA (3) 2.3 0.0023 P8 GC+1d culture AAAAAGAAAA (19) 1.1 0.0011 P8 GC+1d culture ATGACTGCAT (2) 1.1 0.0011 P8 GC+1d culture CAGCCTGAAA (6) 1.1 0.0011 P8 GC+SHH+1d culture TAAAAAAAAA (196) 93.7 0.0937 P8 GC+SHH+1d culture GCCATTGGAA (3) 19.9 0.0199 P8 GC+SHH+1d culture GGGCTGCTCA (7) 11.7 0.0117 P8 GC+SHH+1d culture CAGCCTGAAA (6) 3.5 0.0035 P8 GC+SHH+1d culture TTTTTTAACA (3) 3.5 0.0035 P8 GC+SHH+1d culture AAAAAGAAAA (19) 2.3 0.0023 P8 GC+SHH+1d culture TGCTCTGGAT (2) 1.2 0.0012 3T3 fibroblasts GGGCTGCTCA (7) 7 0.007 3T3 fibroblasts TAAAAAAAAA (196) 7 0.007 3T3 fibroblasts CAGCCTGAAA (6) 3.5 0.0035 3T3 fibroblasts GGATCATTGA (3) 3.5 0.0035 E15 cortex GGGCTGCTCA (7) 24.7 0.0247 E15 cortex TAAAAAAAAA (196) 9.9 0.0099 E15 cortex ATGACTGCAT (2) 4.9 0.0049 E15 cortex GGATCATTGA (3) 4.9 0.0049 P1 cortex TAAAAAAAAA (196) 50 0.05 P1 cortex GTTCCATCAA (4) 9.1 0.0091 P1 cortex AGATGCAAGT 4.5 0.0045 P1 cortex CTGTCTGTAG (2) 4.5 0.0045 P1 cortex GCCATTGGAA (3) 4.5 0.0045 P1 cortex GGGCTGCTCA (7) 4.5 0.0045 P1 cortex TGCTCTGGAT (2) 4.5 0.0045 Hypothalamus TAAAAAAAAA (196) 32.6 0.0326 Hypothalamus GCCATTGGAA (3) 9.1 0.0091 Hypothalamus CAGCCTGAAA (6) 5.4 0.0054 Hypothalamus GGATCATTGA (3) 1.8 0.0018 Hypothalamus GGGCTGCTCA (7) 1.8 0.0018 E12.5 retina GCCATTGGAA (3) 24.4 0.0244 E12.5 retina TAAAAAAAAA (196) 24.4 0.0244 E12.5 retina GGGCTGCTCA (7) 20.7 0.0207 E12.5 retina CAGCCTGAAA (6) 1.9 0.0019 E12.5 retina CTGTCTGTAG (2) 1.9 0.0019 E12.5 retina CTTGGCTCCT (3) 1.9 0.0019 E12.5 retina TTTTTTAACA (3) 1.9 0.0019 E14.5 retina TAAAAAAAAA (196) 41.9 0.0419 E14.5 retina GGGCTGCTCA (7) 12.8 0.0128 E14.5 retina GCCATTGGAA (3) 9.1 0.0091 E14.5 retina ATGACTGCAT (2) 5.5 0.0055 E14.5 retina CAGCCTGAAA (6) 5.5 0.0055 E14.5 retina CTGTCTGTAG (2) 3.6 0.0036 E16.5 retina TAAAAAAAAA (196) 23.5 0.0235 E16.5 retina GCCATTGGAA (3) 14.5 0.0145 E16.5 retina CAGCCTGAAA (6) 10.9 0.0109 E16.5 retina GGGCTGCTCA (7) 9.1 0.0091 E16.5 retina ATGACTGCAT (2) 5.4 0.0054 E16.5 retina CTGTCTGTAG (2) 3.6 0.0036 E16.5 retina AAAAAGAAAA (19) 1.8 0.0018 E16.5 retina GACTTGGCCA (6) 1.8 0.0018 E18.5 retina TAAAAAAAAA (196) 107.3 0.1073 E18.5 retina GCCATTGGAA (3) 36.4 0.0364 E18.5 retina CAGCCTGAAA (6) 16.4 0.0164 E18.5 retina CTGTCTGTAG (2) 5.5 0.0055 E18.5 retina GGGCTGCTCA (7) 1.8 0.0018 E18.5 retina TTTTTTAACA (3) 1.8 0.0018 P0.5 retina TAAAAAAAAA (196) 37.3 0.0373 P0.5 retina GCCATTGGAA (3) 23.6 0.0236 P0.5 retina GGGCTGCTCA (7) 11.8 0.0118 P0.5 retina CAGCCTGAAA (6) 7.9 0.0079 P0.5 retina ATGACTGCAT (2) 5.9 0.0059 P0.5 retina AAAAAGAAAA (19) 3.9 0.0039 P0.5 retina TTTTTTAACA (3) 3.9 0.0039 P0.5 retina GTTCCATCAA (4) 2 0.002 P2.5 retina TAAAAAAAAA (196) 72.2 0.0722 P2.5 retina GCCATTGGAA (3) 12.3 0.0123 P2.5 retina GGGCTGCTCA (7) 8.8 0.0088 P2.5 retina CAGCCTGAAA (6) 7 0.007 P2.5 retina AAAAAGAAAA (19) 3.5 0.0035 P2.5 retina TTTTTTAACA (3) 3.5 0.0035 P2.5 retina ATGACTGCAT (2) 1.8 0.0018 P2.5 retina CTGTCTGTAG (2) 1.8 0.0018 P4.5 retina TAAAAAAAAA (196) 122.8 0.1228 P4.5 retina GCCATTGGAA (3) 15.9 0.0159 P4.5 retina TTTTTTAACA (3) 7.9 0.0079 P4.5 retina AAAAAGAAAA (19) 4 0.004 P4.5 retina CAGCCTGAAA (6) 4 0.004 P4.5 retina TGCTCTGGAT (2) 4 0.004 P4.5 retina ATGACTGCAT (2) 2 0.002 P4.5 retina CTGTCTGTAG (2) 2 0.002 P4.5 retina GGATCATTGA (3) 2 0.002 P4.5 retina GGGCTGCTCA (7) 2 0.002 P6.5 retina TAAAAAAAAA (196) 63.4 0.0634 P6.5 retina GCCATTGGAA (3) 8.3 0.0083 P6.5 retina CAGCCTGAAA (6) 5 0.005 P6.5 retina GGGCTGCTCA (7) 5 0.005 P6.5 retina GGATCATTGA (3) 3.3 0.0033 P6.5 retina TTTTTTAACA (3) 3.3 0.0033 P6.5 retina TGCTCTGGAT (2) 1.7 0.0017 P10.5 crx- retina GCCATTGGAA (3) 39 0.039 P10.5 crx- retina TAAAAAAAAA (196) 9.3 0.0093 P10.5 crx- retina CTGTCTGTAG (2) 5.6 0.0056 P10.5 crx- retina GGGCTGCTCA (7) 5.6 0.0056 P10.5 crx- retina CAGCCTGAAA (6) 3.7 0.0037 P10.5 crx- retina GCTTTGGTCC (3) 3.7 0.0037 P10.5 crx- retina ATGACTGCAT (2) 1.9 0.0019 P10.5 crx- retina CTTGGCTCCT (3) 1.9 0.0019 P10.5 crx- retina GACTTGGCCA (6) 1.9 0.0019 P10.5 crx+ retina GCCATTGGAA (3) 25 0.025 P10.5 crx+ retina TAAAAAAAAA (196) 25 0.025 P10.5 crx+ retina TTTTTTAACA (3) 9.6 0.0096 P10.5 crx+ retina CAGCCTGAAA (6) 7.7 0.0077 P10.5 crx+ retina GGGCTGCTCA (7) 5.8 0.0058 P10.5 crx+ retina GACTTGGCCA (6) 1.9 0.0019 Adult retinal GCCATTGGAA (3) 25.9 0.0259 Adult retinal TAAAAAAAAA (196) 18.5 0.0185 Adult retinal GCTTTGGTCC (3) 1.9 0.0019 Adult retinal GGGCTGCTCA (7) 1.9 0.0019 Adult retinal TGCTCTGGAT (2) 1.9 0.0019 Adult retinal TTTTTTAACA (3) 1.9 0.0019 ONL TAAAAAAAAA (196) 28.7 0.0287 ONL CAGCCTGAAA (6) 5.7 0.0057 ONL AAAAAGAAAA (19) 3.8 0.0038 ONL TGCTCTGGAT (2) 1.9 0.0019 ONL TTTTTTAACA (3) 1.9 0.0019