| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | AGTTCCAGGC (2) CTGGCTCACA (4) GCCAAGTACC (2) TGGGAGCAAC (3) TTTGGCTGTT
| 8 | 0.008 |
| P8 GC+1d culture | CTGGCTCACA (4)
| 2.3 | 0.0023 |
| P8 GC+SHH+1d culture | CTGGCTCACA (4) GCCAAGTACC (2)
| 4.7 | 0.0047 |
| 3T3 fibroblasts | ACCAGAGGCA (3) GCCAAGTACC (2) GTCAAGGGAA (3) TGGGAGCAAC (3)
| 59.6 | 0.0596 |
| E15 cortex | AGTTCCAGGC (2) CTGGCTCACA (4) GCCAAGTACC (2)
| 39.5 | 0.0395 |
| P1 cortex | CTGGCTCACA (4)
| 4.5 | 0.0045 |
| Hypothalamus | AGTTCCAGGC (2) TTTGGCTGTT
| 3.6 | 0.0036 |
| E12.5 retina | CTGGCTCACA (4) GCCAAGTACC (2)
| 5.7 | 0.0057 |
| E14.5 retina | AGTTCCAGGC (2) CTGGCTCACA (4) GCCAAGTACC (2)
| 9.1 | 0.0091 |
| E16.5 retina | CTGGCTCACA (4) GCCAAGTACC (2)
| 3.6 | 0.0036 |
| E18.5 retina | CTGGCTCACA (4)
| 1.8 | 0.0018 |
| P0.5 retina | CTGGCTCACA (4) GCCAAGTACC (2)
| 7.9 | 0.0079 |
| P2.5 retina | AGTTCCAGGC (2) TTTGGCTGTT
| 3.6 | 0.0036 |
| P6.5 retina | CTGGCTCACA (4) GCCAAGTACC (2)
| 6.7 | 0.0067 |
| P10.5 crx- retina | CTGGCTCACA (4) GCCAAGTACC (2)
| 11.1 | 0.0111 |
| P10.5 crx+ retina | ACCAGAGGCA (3) GCCAAGTACC (2)
| 5.7 | 0.0057 |
| Adult retinal | ACCAGAGGCA (3) CTGGCTCACA (4) GCCAAGTACC (2) GTCAAGGGAA (3)
| 14.9 | 0.0149 |
| ONL | AGTTCCAGGC (2) GCCAAGTACC (2) GTCAAGGGAA (3) TGGGAGCAAC (3)
| 11.4 | 0.0114 |