Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.33207
D15Ertd366e
DNA segment, Chr 15, ERATO Doi 366, expressed
15
15 60.4 cM
65970
Mm.33207
3526402A12Rik
RIKEN cDNA 3526402A12 gene
15
319958
Mm.33207
C78376
expressed sequence C78376
15
97958
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 44 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
AGTTCCAGGC (
6
)
1.6
0.0016
P8 Cb GC
CTGGCTCACA
(
5
)
1.6
0.0016
P8 Cb GC
GCCAAGTACC (
7
)
1.6
0.0016
P8 Cb GC
TGGGAGCAAC
(
4
)
1.6
0.0016
P8 Cb GC
TTTGGCTGTT (
6
)
1.6
0.0016
P8 GC+1d culture
CTGGCTCACA
(
5
)
2.3
0.0023
P8 GC+SHH+1d culture
GCCAAGTACC (
7
)
3.5
0.0035
P8 GC+SHH+1d culture
CTGGCTCACA
(
5
)
1.2
0.0012
3T3 fibroblasts
ACCAGAGGCA
(
5
)
42.1
0.0421
3T3 fibroblasts
GTCAAGGGAA
(
5
)
10.5
0.0105
3T3 fibroblasts
GCCAAGTACC (
7
)
3.5
0.0035
3T3 fibroblasts
TGGGAGCAAC
(
4
)
3.5
0.0035
E15 cortex
CTGGCTCACA
(
5
)
24.7
0.0247
E15 cortex
GCCAAGTACC (
7
)
9.9
0.0099
E15 cortex
AGTTCCAGGC (
6
)
4.9
0.0049
P1 cortex
CTGGCTCACA
(
5
)
4.5
0.0045
Hypothalamus
AGTTCCAGGC (
6
)
1.8
0.0018
Hypothalamus
TTTGGCTGTT (
6
)
1.8
0.0018
E12.5 retina
CTGGCTCACA
(
5
)
3.8
0.0038
E12.5 retina
GCCAAGTACC (
7
)
1.9
0.0019
E14.5 retina
CTGGCTCACA
(
5
)
5.5
0.0055
E14.5 retina
AGTTCCAGGC (
6
)
1.8
0.0018
E14.5 retina
GCCAAGTACC (
7
)
1.8
0.0018
E16.5 retina
CTGGCTCACA
(
5
)
1.8
0.0018
E16.5 retina
GCCAAGTACC (
7
)
1.8
0.0018
E18.5 retina
CTGGCTCACA
(
5
)
1.8
0.0018
P0.5 retina
GCCAAGTACC (
7
)
5.9
0.0059
P0.5 retina
CTGGCTCACA
(
5
)
2
0.002
P2.5 retina
AGTTCCAGGC (
6
)
1.8
0.0018
P2.5 retina
TTTGGCTGTT (
6
)
1.8
0.0018
P6.5 retina
GCCAAGTACC (
7
)
5
0.005
P6.5 retina
CTGGCTCACA
(
5
)
1.7
0.0017
P10.5 crx- retina
GCCAAGTACC (
7
)
7.4
0.0074
P10.5 crx- retina
CTGGCTCACA
(
5
)
3.7
0.0037
P10.5 crx+ retina
GCCAAGTACC (
7
)
3.8
0.0038
P10.5 crx+ retina
ACCAGAGGCA
(
5
)
1.9
0.0019
Adult retinal
GTCAAGGGAA
(
5
)
5.6
0.0056
Adult retinal
CTGGCTCACA
(
5
)
3.7
0.0037
Adult retinal
GCCAAGTACC (
7
)
3.7
0.0037
Adult retinal
ACCAGAGGCA
(
5
)
1.9
0.0019
ONL
GCCAAGTACC (
7
)
5.7
0.0057
ONL
AGTTCCAGGC (
6
)
1.9
0.0019
ONL
GTCAAGGGAA
(
5
)
1.9
0.0019
ONL
TGGGAGCAAC
(
4
)
1.9
0.0019
