| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | AAAAAAAAAA (2) AAGCAGGGTC CAGAAGAAAG CAGACAGACA (5) CCCGGAGCCT GCCAAGTGGA (2)
| 311.6 | 0.3116 |
| Cb medulloblastoma | AAAAAAAAAA (2) CAAAAAAAAG CAGAAGAAAG GCCAAGTGGA (2)
| 883.4 | 0.8834 |
| P8 GC+1d culture | AAAAAAAAAA (2) AAGCAGGGTC CAAAAAAAAG CAGAAGAAAG CAGACAGACA (5) CCCGGAGCCT GCCAAGTGGA (2)
| 444 | 0.444 |
| P8 GC+SHH+1d culture | AAAAAAAAAA (2) AAGCAGGGTC CAGAAGAAAG GCCAAGTGGA (2) TGCGCGGTCA
| 495.3 | 0.4953 |
| 3T3 fibroblasts | AAAAAAAAAA (2) GCCAAGTGGA (2)
| 227.8 | 0.2278 |
| E15 cortex | AAAAAAAAAA (2) GCCAAGTGGA (2)
| 321.7 | 0.3217 |
| P1 cortex | AAAAAAAAAA (2) AAGCAGGGTC GCCAAGTGGA (2)
| 331.7 | 0.3317 |
| Hypothalamus | AAAAAAAAAA (2) AAGCAGGGTC CAGAAGAAAG GAGCTTCTCT GCCAAGTGGA (2) TGTAACCTGT
| 175.7 | 0.1757 |
| E12.5 retina | AAAAAAAAAA (2) AAACAGGGTC (3) AAGCAGGGTC CAGAAGAAAG GAGCTTCTCT GCCAAGTGGA (2) TGTAACCTGT
| 416.8 | 0.4168 |
| E14.5 retina | AAAAAAAAAA (2) AAGCAGGGTC CAGAAGAAAG GAGCTTCTCT GCCAAGTGGA (2) TGCGCGGTCA
| 249.5 | 0.2495 |
| E16.5 retina | AAAAAAAAAA (2) CAGAAGAAAG GCCAAGTGGA (2)
| 284.3 | 0.2843 |
| E18.5 retina | AAAAAAAAAA (2) CAAAAAAAAG CAGAAGAAAG GCCAAGTGGA (2)
| 478.4 | 0.4784 |
| P0.5 retina | AAAAAAAAAA (2) AAGCAGGGTC CAAAAAAAAG CAGAAGAAAG CCCGGAGCCT GCCAAGTGGA (2) TGTAACCTGT
| 270.9 | 0.2709 |
| P2.5 retina | AAAAAAAAAA (2) AAACAGGGTC (3) CAGAAGAAAG GCCAAGTGGA (2)
| 473.4 | 0.4734 |
| P4.5 retina | AAAAAAAAAA (2) CAGAAGAAAG GCCAAGTGGA (2) TGCGCGGTCA
| 410.1 | 0.4101 |
| P6.5 retina | AAAAAAAAAA (2) CAGAAGAAAG CAGACAGACA (5) CCCGGAGCCT GCCAAGTGGA (2)
| 410.3 | 0.4103 |
| P10.5 crx- retina | AAAAAAAAAA (2) AAACAGGGTC (3) CAGAAGAAAG GCCAAGTGGA (2)
| 184 | 0.184 |
| P10.5 crx+ retina | AAAAAAAAAA (2) CAAAAAAAAG CAGAAGAAAG CAGACAGACA (5) GCCAAGTGGA (2)
| 188.3 | 0.1883 |
| Adult retinal | AAAAAAAAAA (2) CAAAAAAAAG GCCAAGTGGA (2)
| 127.8 | 0.1278 |
| ONL | AAAAAAAAAA (2) AAGCAGGGTC CAGAAGAAAG GCCAAGTGGA (2) TGTAACCTGT
| 134 | 0.134 |