Mouse Retina SAGE Library

[Home]    [Libraries]    [Images]

---

Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

---

UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.33284	Lrrk1	leucine-rich repeat kinase 1	7		233328
Mm.33284	C230002E15Rik	RIKEN cDNA C230002E15 gene	7		319708
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 75 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CCCAGTCCCT (2) CTGGGCCCAG (2) GGAAGCCACA (2) GGCAGCAAAC (3) TGCTCAGAAA (2) 29.4 0.0294 Cb medulloblastoma CCTGCAACCA CTGGGCCCAG (2) GGCAGCAAAC (3) GTTTAAAAAA (2) TGCTCAGAAA (2) 39.2 0.0392 P8 GC+1d culture CCCAGTCCCT (2) CCTGCAACCA CTGGGCCCAG (2) GGCAGCAAAC (3) 46.8 0.0468 P8 GC+SHH+1d culture CCCAGTCCCT (2) CCTGCAACCA CTGGGCCCAG (2) GGAAGCCACA (2) GGCAGCAAAC (3) GTTTAAAAAA (2) 28.2 0.0282 3T3 fibroblasts CCTGCAACCA CCTGCAACCC CTGGGCCCAG (2) CTGGTGAGAC (2) 63.1 0.0631 E15 cortex CCTGCAACCA CCTGCAACCC GGAAGCCACA (2) GGCAGCAAAC (3) 103.8 0.1038 P1 cortex CCTGCAACCA CTGGGCCCAG (2) GGCAGCAAAC (3) 45.4 0.0454 Hypothalamus CCCAGTCCCT (2) CCTGCAACCA CTGGGCCCAG (2) GGCAGCAAAC (3) 38.1 0.0381 E12.5 retina CCTGCAACCA CTGGGCCCAG (2) GGCAGCAAAC (3) 9.5 0.0095 E14.5 retina CCTGCAACCA CCTGCAACCC CTGGGCCCAG (2) GTTTAAAAAA (2) 12.7 0.0127 E16.5 retina CTGGGCCCAG (2) GGCAGCAAAC (3) 9 0.009 E18.5 retina CTGGGCCCAG (2) CTGGTGAGAC (2) GTTTAAAAAA (2) 9 0.009 P0.5 retina CCTGCAACCA CTGGGCCCAG (2) GGCAGCAAAC (3) 27.6 0.0276 P2.5 retina CCCAGTCCCT (2) CCTGCAACCA CTGGGCCCAG (2) GGCAGCAAAC (3) GTTTAAAAAA (2) 33.5 0.0335 P4.5 retina CCCAGTCCCT (2) CCTGCAACCA CTGGGCCCAG (2) GGCAGCAAAC (3) 31.8 0.0318 P6.5 retina CCCAGTCCCT (2) CCTGCAACCA CTGGGCCCAG (2) GGCAGCAAAC (3) TGCTCAGAAA (2) 43.4 0.0434 P10.5 crx- retina CCTGCAACCA CTGGGCCCAG (2) GGCAGCAAAC (3) 39 0.039 P10.5 crx+ retina CCCAGTCCCT (2) CCTGCAACCA CTGGGCCCAG (2) GGCAGCAAAC (3) 48.1 0.0481 Adult retinal CCTGCAACCA CTGGGCCCAG (2) GGCAGCAAAC (3) 40.8 0.0408 ONL TGCTCAGAAA (2) 1.9 0.0019