Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.333349	Prkwnk1	protein kinase, lysine deficient 1	6		232341
Mm.333349	4833412E19Rik	RIKEN cDNA 4833412E19 gene	6		73905
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 85 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GAAAAAAAAA (2) GCTAAAGCTA (2) TAACTTTGCC (5) TGGTGTTTGG (2) TTGGCCAACC 58.8 0.0588 Cb medulloblastoma ACCCCAGCAG (2) CACATCCAAA GAAAAAAAAA (2) TGGTGTTTGG (2) 180.3 0.1803 P8 GC+1d culture CTGCATTTGG (2) GAAAAAAAAA (2) TGGTGTTTGG (2) 44.5 0.0445 P8 GC+SHH+1d culture CTGCATTTGG (2) GAAAAAAAAA (2) TAACTTTGCC (5) TCACAGCAAC (3) TGGTGTTTGG (2) 83.2 0.0832 3T3 fibroblasts CTGCATTTGG (2) GCTAAAGCTA (2) GTGGCACTTG (2) TGGTGTTTGG (2) 28 0.028 E15 cortex GAAAAAAAAA (2) GCTAAAGCTA (2) TGGTGTTTGG (2) 69.2 0.0692 P1 cortex GAAAAAAAAA (2) TGGTGTTTGG (2) TTGGCCAACC 54.5 0.0545 Hypothalamus GAAAAAAAAA (2) TCACAGCAAC (3) TGGTGTTTGG (2) TTGGCCAACC 76 0.076 E12.5 retina GAAAAAAAAA (2) GCTAAAGCTA (2) GCTCTGATAC TGGTGTTTGG (2) 52.6 0.0526 E14.5 retina GAAAAAAAAA (2) GCCTAAGGCT (2) GCTCTGATAC TAACTTTGCC (5) 43.7 0.0437 E16.5 retina CACATCCAAA GAAAAAAAAA (2) GCTCTGATAC TAACTTTGCC (5) TCACAGCAAC (3) 30.7 0.0307 E18.5 retina CACATCCAAA GAAAAAAAAA (2) TGGTGTTTGG (2) 69.1 0.0691 P0.5 retina CTGCATTTGG (2) GAAAAAAAAA (2) TGGTGTTTGG (2) TTGGCCAACC 45.2 0.0452 P2.5 retina CTGCATTTGG (2) GAAAAAAAAA (2) GCTAAAGCTA (2) TAACTTTGCC (5) TGGTGTTTGG (2) TTGGCCAACC 96.9 0.0969 P4.5 retina ACCCCAGCAG (2) CACATCCAAA GAAAAAAAAA (2) GCTAAAGCTA (2) GCTCTGATAC TAACTTTGCC (5) TGGTGTTTGG (2) 67.5 0.0675 P6.5 retina ACCCCAGCAG (2) CACATCCAAA GAAAAAAAAA (2) TAACTTTGCC (5) TCACAGCAAC (3) TGGTGTTTGG (2) 50.1 0.0501 P10.5 crx- retina GAAAAAAAAA (2) GCTCTGATAC 18.6 0.0186 P10.5 crx+ retina GAAAAAAAAA (2) TAACTTTGCC (5) 44.2 0.0442 Adult retinal CTGCATTTGG (2) GAAAAAAAAA (2) TCACAGCAAC (3) TTGGCCAACC 22.4 0.0224 ONL CACATCCAAA GAAAAAAAAA (2) GCCTAAGGCT (2) GCTCTGATAC GTGGCACTTG (2) TGGTGTTTGG (2) TTGGCCAACC 38.2 0.0382