Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.333357	Cecr2	cat eye syndrome chromosome region, candidate 2 homolog (human)	6	6 54.0 cM	330409
Mm.333357	Gtl4	gene trap locus 4	6		14895
Gene Ontology	nuclear euchromatin
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 72 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC ACTCAAGTCA (3) GAGGAGGAGG (2) GGCCTGTCAG (2) GTCTGCTGGT (2) GTGGCACAGG (4) TGCCTTTTTT (3) 16.2 0.0162 Cb medulloblastoma TGCCTTTTTT (3) 2.3 0.0023 P8 GC+1d culture ACTCAAGTCA (3) GGCCTGTCAG (2) GTGGCACAGG (4) TGCCTTTTTT (3) 5.6 0.0056 P8 GC+SHH+1d culture ACTCAAGTCA (3) GAGGAGGAGG (2) GGCCTGTCAG (2) GTCTGCTGGT (2) TGCCTTTTTT (3) 7.1 0.0071 3T3 fibroblasts GAGGAGGAGG (2) GTGGCACAGG (4) 7 0.007 E15 cortex GAGGAGGAGG (2) GGCCTGTCAG (2) 9.8 0.0098 P1 cortex GAGGAGGAGG (2) 4.5 0.0045 Hypothalamus ACTCAAGTCA (3) GAGGAGGAGG (2) TGCCTTTTTT (3) TGGGGCTGGG (5) 12.6 0.0126 E12.5 retina GAGGAGGAGG (2) GTGGCACAGG (4) 3.8 0.0038 E14.5 retina ACTCAAGTCA (3) GTCTGCTGGT (2) GTGGCACAGG (4) TGCCTTTTTT (3) 9 0.009 E16.5 retina TGCCTTTTTT (3) 3.6 0.0036 E18.5 retina GTGGCACAGG (4) TGCCTTTTTT (3) 7.2 0.0072 P0.5 retina ACTCAAGTCA (3) GGCCTGTCAG (2) GTGGCACAGG (4) TGCCTTTTTT (3) TTCAATGTAG (2) 15.8 0.0158 P2.5 retina ACTCAAGTCA (3) GAGGAGGAGG (2) GTGGCACAGG (4) TGCCTTTTTT (3) 7.2 0.0072 P4.5 retina GAGGAGGAGG (2) GGCCTGTCAG (2) GTGGCACAGG (4) 8 0.008 P6.5 retina ACTCAAGTCA (3) GTGGCACAGG (4) TGCCTTTTTT (3) TTCAATGTAG (2) TTGATTTAAA (2) 10.1 0.0101 P10.5 crx- retina ACTCAAGTCA (3) GAGGAGGAGG (2) GTGGCACAGG (4) TGCCTTTTTT (3) TTGATTTAAA (2) 11.3 0.0113 P10.5 crx+ retina GGCCTGTCAG (2) GTCTGCTGGT (2) GTGGCACAGG (4) TGCCTTTTTT (3) TTCAATGTAG (2) 22.9 0.0229 Adult retinal GAGGAGGAGG (2) GGCCTGTCAG (2) GTCTGCTGGT (2) GTGGCACAGG (4) TGCCTTTTTT (3) 24.2 0.0242 ONL ACTCAAGTCA (3) GAGGAGGAGG (2) GTCTGCTGGT (2) GTGGCACAGG (4) TGCCTTTTTT (3) TGGGGCTGGG (5) 17.1 0.0171