Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.334284	B930086L07Rik	RIKEN cDNA B930086L07 gene	7		320030
Mm.334284	D930021H04Rik	RIKEN cDNA D930021H04 gene	7		399575
Mm.334284	T25625	expressed sequence T25625	7		97432
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 117 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CCTTTAATCC (3) CGCCACCACC (3) GCTCTACCAG (3) TGTGCAAACA TTCTATTCAT (6) 75 0.075 Cb medulloblastoma AAAGGAAAAA (2) CCTTTAATCC (3) CGCCACCACC (3) GAACAGTGTG (2) 57.7 0.0577 P8 GC+1d culture CCTTTAATCC (3) CGCCACCACC (3) GAACAGTGTG (2) GCTCTACCAG (3) TGTGCAAACA TTCTATTCAT (6) 43.4 0.0434 P8 GC+SHH+1d culture AAAGGAAAAA (2) CCTTTAATCC (3) CGCCACCACC (3) GAACAGTGTG (2) GCTCTACCAG (3) GGGAGTGAGG (3) TGTGCAAACA TTCTATTCAT (6) 52.9 0.0529 3T3 fibroblasts CCTTTAATCC (3) CGCCACCACC (3) TGTGCAAACA 94.6 0.0946 E15 cortex AAAGGAAAAA (2) CCTTTAATCC (3) CGCCACCACC (3) GCTCTACCAG (3) TGTGCAAACA TTCTATTCAT (6) 93.8 0.0938 P1 cortex CCTTTAATCC (3) CGCCACCACC (3) GCTCTACCAG (3) TTCTATTCAT (6) 172.6 0.1726 Hypothalamus AAAGGAAAAA (2) AGGAAGGAAG (3) AGGGAGGGGC (3) CCTTTAATCC (3) CGCCACCACC (3) GAACAGTGTG (2) GCAGCACATA TGTGCAAACA 34.3 0.0343 E12.5 retina CCTTTAATCC (3) CGCCACCACC (3) GAACAGTGTG (2) TGTGCAAACA TTCTATTCAT (6) 88.3 0.0883 E14.5 retina AGGGAGGGGC (3) CCTTTAATCC (3) CGCCACCACC (3) GAACAGTGTG (2) GCGGCCCTCC GGGAGTGAGG (3) TTCTATTCAT (6) 136.5 0.1365 E16.5 retina AAAGGAAAAA (2) CCTTTAATCC (3) CGCCACCACC (3) GAACAGTGTG (2) TGTGCAAACA TTCTATTCAT (6) 88.6 0.0886 E18.5 retina AAAGGAAAAA (2) CCTTTAATCC (3) CGCCACCACC (3) GAACAGTGTG (2) GCTCTACCAG (3) TTCTATTCAT (6) 45.3 0.0453 P0.5 retina CCTTTAATCC (3) CGCCACCACC (3) GAACAGTGTG (2) GCTCTACCAG (3) TGTGCAAACA 94.2 0.0942 P2.5 retina AAGATAAGCA CCTTTAATCC (3) CGCCACCACC (3) GAACAGTGTG (2) GCTCTACCAG (3) TGTGCAAACA TTCTATTCAT (6) 98.6 0.0986 P4.5 retina AAAGGAAAAA (2) AAGATAAGCA AGGAAGGAAG (3) CCTTTAATCC (3) CGCCACCACC (3) GAACAGTGTG (2) GCTCTACCAG (3) TGTGCAAACA TTCTATTCAT (6) 73.4 0.0734 P6.5 retina CCTTTAATCC (3) CGCCACCACC (3) GCTCTACCAG (3) TGTGCAAACA TTCTATTCAT (6) 106.6 0.1066 P10.5 crx- retina CCTTTAATCC (3) CGCCACCACC (3) GAACAGTGTG (2) TTCTATTCAT (6) 76.3 0.0763 P10.5 crx+ retina AAAGGAAAAA (2) AGGAAGGAAG (3) CCTTTAATCC (3) GAACAGTGTG (2) GCTCTACCAG (3) TTCTATTCAT (6) 53.7 0.0537 Adult retinal CCTTTAATCC (3) CGCCACCACC (3) GAACAGTGTG (2) GCGGCCCTCC GCTCTACCAG (3) TTCTATTCAT (6) 161.3 0.1613 ONL AAGATAAGCA CCTTTAATCC (3) CGCCACCACC (3) GAACAGTGTG (2) GCAGCACATA GCGGCCCTCC GCTCTACCAG (3) 99.5 0.0995