Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.336087	Hmgb3	high mobility group box 3	X	X A7.1	15354
Gene Ontology	chromatin | chromosome | DNA binding | DNA packaging | negative regulation of B-cell differentiation | negative regulation of myeloid blood cell differentiation | nucleus | regulation of transcription, DNA-dependent
Human Homolog	HMGB3[high-mobility group box 3]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

Total 6 In Situ Hybridization Images

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SAGE Tags

Total 62 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AATAAAAGCT (2) AGAAGTGTTT CCGGCCGACC GCGGACGACG (2) TCTAGCAAAG TCTTTTGGTT (2) 17.9 0.0179 Cb medulloblastoma TCTTTTGGTT (2) 2.3 0.0023 P8 GC+1d culture AATAAAAGCT (2) AGAAGTGTTT CCGGCCGACC GCGGACGACG (2) TCTTTTGGTT (2) 28.5 0.0285 P8 GC+SHH+1d culture AGAAGTGTTT CCGGCCGACC GCGGACGACG (2) TCTAGCAAAG TCTTTTGGTT (2) 32.7 0.0327 3T3 fibroblasts CGGGGCGAGC (3) GCGGACGACG (2) TCTTTTGGTT (2) 17.5 0.0175 E15 cortex AGAAGTGTTT TCTTTTGGTT (2) 14.8 0.0148 P1 cortex CGGGGCGAGC (3) TCTTTTGGTT (2) 9 0.009 Hypothalamus CACAAGATGT TCTTTTGGTT (2) 7.2 0.0072 E12.5 retina AGAAGTGTTT CCGGCCGACC 28.2 0.0282 E14.5 retina AGAAGTGTTT CACAAGATGT CCGGCCGACC GCGGACGACG (2) 12.7 0.0127 E16.5 retina AGAAGTGTTT CCGGCCGACC GCGGACGACG (2) TCTTTTGGTT (2) 21.7 0.0217 E18.5 retina AAGGGAAGAA AGAAGTGTTT 12.7 0.0127 P0.5 retina AGAAGTGTTT GCGGACGACG (2) TCTTTTGGTT (2) 45.1 0.0451 P2.5 retina AGAAGTGTTT CCGGCCGACC TCTTTTGGTT (2) 17.7 0.0177 P4.5 retina AGAAGTGTTT CACAAGATGT CCGGCCGACC TCTTTTGGTT (2) 10 0.01 P6.5 retina AAGGGAAGAA AGAAGTGTTT CCGGCCGACC 18.3 0.0183 P10.5 crx- retina CACAAGATGT GCGGACGACG (2) TCTTTTGGTT (2) 5.7 0.0057 P10.5 crx+ retina AGAAGTGTTT 3.8 0.0038 Adult retinal AGAAGTGTTT GCGGACGACG (2) TCTTTTGGTT (2) 9.4 0.0094 ONL AAGGGAAGAA AATAAAAGCT (2) CGGGGCGAGC (3) TCTTTTGGTT (2) 7.6 0.0076