| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | GCACTGCCCT (5) GCCCCCTTCC GGACAGGACT TCTTGGGCTA
| 6.4 | 0.0064 |
| Cb medulloblastoma | GATCCTAAGC (3) GCCACAAACC GCCCCCTTCC
| 6.9 | 0.0069 |
| P8 GC+1d culture | GATCCTAAGC (3) GCACTGCCCT (5) GCCCCCTTCC GGACAGGACT
| 9.1 | 0.0091 |
| P8 GC+SHH+1d culture | CTGGGGCTCT GATCCTAAGC (3) GCACTGCCCT (5) GCCCCCTTCC TCTTGGGCTA
| 7.1 | 0.0071 |
| 3T3 fibroblasts | GCACTGCCCT (5) GCCCCCTTCC
| 49 | 0.049 |
| E15 cortex | GCCACAAACC
| 4.9 | 0.0049 |
| P1 cortex | TCTTGGGCTA
| 4.5 | 0.0045 |
| Hypothalamus | TCTTGGGCTA
| 3.6 | 0.0036 |
| E12.5 retina | CTGGGGCTCT GCCCCCTTCC TCTTGGGCTA
| 5.7 | 0.0057 |
| E14.5 retina | ATGTACAGCA CTGGGGCTCT GCCACAAACC
| 7.2 | 0.0072 |
| E16.5 retina | GCCACAAACC TCTTGGGCTA
| 3.6 | 0.0036 |
| E18.5 retina | ATGTACAGCA
| 1.8 | 0.0018 |
| P0.5 retina | TCTTGGGCTA
| 2 | 0.002 |
| P2.5 retina | GGACAGGACT
| 1.8 | 0.0018 |
| P4.5 retina | GCCCCCTTCC
| 2 | 0.002 |
| P6.5 retina | ATGTACAGCA GGACAGGACT TCTTGGGCTA
| 11.7 | 0.0117 |
| P10.5 crx- retina | ATGTACAGCA GCCCCCTTCC GGACAGGACT TCTTGGGCTA
| 11.2 | 0.0112 |
| P10.5 crx+ retina | GATCCTAAGC (3) GCCCCCTTCC TCTTGGGCTA
| 9.6 | 0.0096 |
| Adult retinal | GCCCCCTTCC GGACAGGACT TCTTGGGCTA
| 24.1 | 0.0241 |
| ONL | GGACAGGACT TCTTGGGCTA
| 5.7 | 0.0057 |