Mouse Retina SAGE Library

[Home]    [Libraries]    [Images]

---

Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

---

UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.337825	6530402N02Rik	RIKEN cDNA 6530402N02 gene	3		226548
Gene Ontology	endoplasmic reticulum | Golgi apparatus | integral to membrane | metanephros development | peptidase activity | positive regulation of enzyme activity | protein binding | protein processing
Human Homolog	APH-1A[likely ortholog of C. elegans anterior pharynx defective 1A]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 65 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GCATCGCAGG GGGGCTCTGG (3) 18 0.018 Cb medulloblastoma GCATCGCAGG GCCCTGGAGA GGGCTCTGGC GGGGCTCTGG (3) 27.8 0.0278 P8 GC+1d culture CACTTCCTTC GCATCGCAGG GGGCTCTGGC GGGGCTCTGG (3) 25 0.025 P8 GC+SHH+1d culture GCATCGCAGG GGGGCTCTGG (3) 23.4 0.0234 3T3 fibroblasts GCATCGCAGG GCCCTGGAGA GGGGCTCTGG (3) 49 0.049 E15 cortex GCATCGCAGG GGGGCTCTGG (3) 39.6 0.0396 P1 cortex GGGCTCTGGC GGGGCTCTGG (3) 13.6 0.0136 Hypothalamus GAGTGGGCAG GCATCGCAGG GCCCTGGAGA GGGCTCTGGG GGGGCTCTGG (3) 19.9 0.0199 E12.5 retina GACTCCACCC (2) GCATCGCAGG GGGCTCTGGG GGGGCTCTGG (3) GTAGTGGGAG 24.4 0.0244 E14.5 retina GAGTGGGCAG GCATCGCAGG GGGGCTCTGG (3) GTAGTGGGAG 9 0.009 E16.5 retina GCATCGCAGG GGGCTCTGGG 5.4 0.0054 E18.5 retina GAGTGGGCAG GCATCGCAGG GGGGCTCTGG (3) GGGGGCTCTG 18.1 0.0181 P0.5 retina GACTCCACCC (2) GCATCGCAGG GGGGCTCTGG (3) GTAGTGGGAG 23.7 0.0237 P2.5 retina GCATCGCAGG GGGGCTCTGG (3) GGGGGCTCTG 17.6 0.0176 P4.5 retina GCATCGCAGG GGGGCTCTGG (3) GGGGGCTCTG 19.8 0.0198 P6.5 retina GCATCGCAGG GGGGCTCTGG (3) 11.7 0.0117 P10.5 crx- retina GCATCGCAGG GGGGCTCTGG (3) GGGGGCTCTG 27.9 0.0279 P10.5 crx+ retina GCATCGCAGG GGGGCTCTGG (3) GTAGTGGGAG 25 0.025 Adult retinal GCATCGCAGG GGGGCTCTGG (3) GTAGTGGGAG 22.3 0.0223 ONL CACTTCCTTC GCATCGCAGG GGGCTCTGGC GGGCTCTGGG GGGGCTCTGG (3) 28.7 0.0287