Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.339491	2210411K19Rik	RIKEN cDNA 2210411K19 gene	10		70164
Mm.339491	Rpl41	ribosomal protein L41	10		67945
Gene Ontology	protein biosynthesis | ribosome | structural constituent of ribosome
Human Homolog	RPL41[ribosomal protein L41]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 127 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC ACTACTTTGC (3) AGAGCGAAGT (3) ATGGTGTTTC CAGGAGCAGA (3) GCGCAGGAGT TTTTTTTTTT (2) 99.5 0.0995 Cb medulloblastoma ACTACTTTGC (3) AGAGCGAAGT (3) ATGGTGTTTC GCGCAGGAGT TTTTTTTTTT (2) 57.8 0.0578 P8 GC+1d culture ACTACTTTGC (3) AGAGCGAAGT (3) ATCGGGTTTT (2) ATGGTGTTTC GCGCAGGAGT TTTTTTTTTT (2) 92.5 0.0925 P8 GC+SHH+1d culture ACTACTTTGC (3) ACTAGTGCTT (4) AGAGCGAAGT (3) ATGGTGTTTC GCGCAGGAGT TTTTTTTTTT (2) 80.9 0.0809 3T3 fibroblasts AGAGCGAAGT (3) AGAGCGAATG (2) ATGGTGTTTC CAGGAGCAGA (3) GCGCAGGAGT GTCATAGCTG (2) 1135.6 1.1356 E15 cortex AGAGCGAAGT (3) AGTGTGTGTG (4) ATGGTGTTTC GCGCAGGAGT GTCATAGCTG (2) TTTTTTTTTT (2) 227.4 0.2274 P1 cortex AGAGCGAAGT (3) ATCGGGTTTT (2) ATGGTGTTTC TTTTTTTTTT (2) 163.5 0.1635 Hypothalamus AGAGCGAAGT (3) AGGGAGGGGC (3) ATGGTGTTTC GAATTTAAAA GCGCAGGAGT TTTTTTTTTT (2) 47 0.047 E12.5 retina ACTACTTTGC (3) ACTAGTGCTT (4) AGAGCGAAGT (3) ATCGGGTTTT (2) ATGGTGTTTC CAGGAGCAGA (3) GCGCAGGAGT TTTTTTTTTT (2) 148.3 0.1483 E14.5 retina ACTACTTTGC (3) AGAGCGAAGT (3) AGGGAGGGGC (3) AGTGTGTGTG (4) ATGGTGTTTC GCGCAGGAGT TAAGCCAGCC (2) TTTTTTTTTT (2) 49.1 0.0491 E16.5 retina ACTACTTTGC (3) AGAGCGAAGT (3) AGTGTGTGTG (4) ATGGTGTTTC GCGCAGGAGT TTTTTTTTTT (2) 27 0.027 E18.5 retina AGAGCGAAGT (3) ATGGTGTTTC GAATTTAAAA GCGCAGGAGT TTTTTTTTTT (2) 52.7 0.0527 P0.5 retina ACTACTTTGC (3) AGAGCGAAGT (3) ATCGGGTTTT (2) ATGGTGTTTC GCGCAGGAGT GTCATAGCTG (2) TAAGCCAGCC (2) TTTTTTTTTT (2) 155.1 0.1551 P2.5 retina AGAGCGAAGT (3) ATCGGGTTTT (2) ATGGTGTTTC GCGCAGGAGT GTCATAGCTG (2) TTTTTTTTTT (2) 52.8 0.0528 P4.5 retina ACTACTTTGC (3) ACTAGTGCTT (4) AGAGCGAAGT (3) ATGGTGTTTC GAATTTAAAA GCGCAGGAGT GTCATAGCTG (2) TAAGCCAGCC (2) TTTTTTTTTT (2) 65.5 0.0655 P6.5 retina ACTACTTTGC (3) AGAGCGAAGT (3) ATCGGGTTTT (2) ATGGTGTTTC GAATTTAAAA GCGCAGGAGT GTCATAGCTG (2) TTTTTTTTTT (2) 59.9 0.0599 P10.5 crx- retina ACTACTTTGC (3) AGAGCGAAGT (3) ATGGTGTTTC GAATTTAAAA GCGCAGGAGT 52.1 0.0521 P10.5 crx+ retina ACTACTTTGC (3) AGAGCGAAGT (3) ATGGTGTTTC CAGGAGCAGA (3) GCGCAGGAGT TTTTTTTTTT (2) 101.8 0.1018 Adult retinal ACTACTTTGC (3) AGAGCGAAGT (3) ATGGTGTTTC GCGCAGGAGT GTCATAGCTG (2) TTTTTTTTTT (2) 68.7 0.0687 ONL AGAGCGAAGT (3) AGTGTGTGTG (4) ATCGGGTTTT (2) ATGGTGTTTC GTCATAGCTG (2) TAAGCCAGCC (2) TTTTTTTTTT (2) 86 0.086