Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.340658	Rpl27	ribosomal protein L27	11		19942
Gene Ontology	cytosolic ribosome (sensu Eukarya) | ribonucleoprotein complex | ribosome biogenesis | structural constituent of ribosome
Human Homolog	RPL27[ribosomal protein L27]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 92 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CCCACAAGGA (2) CCCACAAGGT GCCAAGAAGA GCCTGTAAGG GCTGTAAGGG GGCAAGAAGA GGGAAAAAAA (5) 84.7 0.0847 Cb medulloblastoma CCCACAAGCT (2) CCCACAAGGT GGGAAAAAAA (5) 108.7 0.1087 P8 GC+1d culture AGGTGGTTGT (2) CCCACAAGGT GCTGTAAGGG GGGAAAAAAA (5) 42.2 0.0422 P8 GC+SHH+1d culture ACTAGTGCTT (4) AGGTGGTTGT (2) CCCACAAGGT GGCAAGAAGA GGGAAAAAAA (5) 49.3 0.0493 3T3 fibroblasts CCCACAAGGT GCCAAGAAGA GTCATAGCTG (2) 133.2 0.1332 E15 cortex CCCACAAGCT (2) CCCACAAGGT GTCATAGCTG (2) 49.4 0.0494 P1 cortex AAACCCGGGA CCCACAAGGT GGGAAAAAAA (5) 22.6 0.0226 Hypothalamus CCCACAAGCT (2) CCCACAAGGT GCAGCTGTCA GGGAAAAAAA (5) 61.6 0.0616 E12.5 retina ACTAGTGCTT (4) AGGTGGTTGT (2) CCCACAAGGT GCTGTAAGGG 80.8 0.0808 E14.5 retina AAACCCGGGA AGGTGGTTGT (2) CCCACAAGGT GCAGCTGTCA GGCAAGAAGA GGCAATAACA (2) GGGAAAAAAA (5) 27.2 0.0272 E16.5 retina AAACCCGGGA AGGTGGTTGT (2) CATTTCAATT (2) CCCACAAGGT GCCTGTAAGG GCTGTAAGGG GGGAAAAAAA (5) 59.7 0.0597 E18.5 retina CCCACAAGGT GCTGTAAGGG GGCAATAACA (2) GGGAAAAAAA (5) 25.4 0.0254 P0.5 retina AGGTGGTTGT (2) CCCACAAGGA (2) CCCACAAGGT GGGAAAAAAA (5) GTCATAGCTG (2) 88.3 0.0883 P2.5 retina CCCACAAGGT GCAGCTGTCA GGGAAAAAAA (5) GTCATAGCTG (2) 42.3 0.0423 P4.5 retina ACTAGTGCTT (4) CCCACAAGGT GCTGTAAGGG GGCAAGAAGA GGCAATAACA (2) GGGAAAAAAA (5) GTCATAGCTG (2) 41.7 0.0417 P6.5 retina CCCACAAGGT GCTGTAAGGG GGCAATAACA (2) GGGAAAAAAA (5) GTCATAGCTG (2) 55 0.055 P10.5 crx- retina AGGTGGTTGT (2) CCCACAAGGT GGGAAAAAAA (5) 105.8 0.1058 P10.5 crx+ retina AGGTGGTTGT (2) CCCACAAGGT GGGAAAAAAA (5) 50 0.05 Adult retinal AGGTGGTTGT (2) CATTTCAATT (2) CCCACAAGGT GCTGTAAGGG GGGAAAAAAA (5) GTCATAGCTG (2) 61.3 0.0613 ONL CCCACAAGGT GCTGTAAGGG GGCAATAACA (2) GGGAAAAAAA (5) GTCATAGCTG (2) 72.6 0.0726