Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.344671	Sap18	Sin3-associated polypeptide 18	14	14 28.5 cM	20220
Gene Ontology	chromatin modification | histone deacetylase complex | molecular_function unknown | regulation of transcription, DNA-dependent | transcription factor complex
Human Homolog	SAP18[sin3-associated polypeptide, 18kDa]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 102 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC ACCCTGCAGT GCAGTTCACA TACAGTGACT (2) TGTTCAATCA 34.3 0.0343 Cb medulloblastoma ACCCTGCAGT GCAGTTCACA TACAGTGACT (2) TGTGCTTCTA TGTTCAATCA TGTTCATCAA 39.3 0.0393 P8 GC+1d culture ACCCTGCAGT ACCCTGCTGT GCAGTTCACA TGTTCAATCA 22.8 0.0228 P8 GC+SHH+1d culture ACCCTGCAGT GCAGTTCACA TACAGTGACT (2) TGTTCAATCA 33.9 0.0339 3T3 fibroblasts ACCCTGCAGT GTCATAGCTG (2) GTGCTGCCAA (2) TACAGTGACT (2) TGTTCAATCA 59.5 0.0595 E15 cortex ACCCTGCAGT ACCCTGCTGT GCAGTTCACA GTCATAGCTG (2) TGTGCTTCTA 44.3 0.0443 P1 cortex ACCCTGCAGT ACCCTGCTGT GCAGTTCACA TACAGTGACT (2) TGTTCAATCA 31.7 0.0317 Hypothalamus ACCCTGCAGT ACCCTGCTGT GCAGTTCACA GTGCCTGCCA TACAGTGACT (2) TATTTCACAA TGTTCAATCA 50.6 0.0506 E12.5 retina ACCCTGCAGT ACCCTGCTGT CCTGGCTTTG (3) GCAGTTCACA TGTTCAATCA 26.4 0.0264 E14.5 retina ACCCTGCAGT ACCCTGCTGT CCTGGCTTTG (3) GCAGTTCACA GTGCTGCCAA (2) TGTGCTTCTA TGTTCAATCA 30.9 0.0309 E16.5 retina ACCCTGCAGT ACCCTGCTGT CCTGGCTTTG (3) GCAGTTCACA TATTTCACAA TGTTCAATCA 28.9 0.0289 E18.5 retina ACCCTGCAGT CCTGGCTTTG (3) GCAGTTCACA TATTTCACAA TGTTCAATCA 54.6 0.0546 P0.5 retina ACCCTGCAGT ACCCTGCTGT GCAGTTCACA GTCATAGCTG (2) TGTTCAATCA 35.3 0.0353 P2.5 retina ACCCTGCAGT ACCCTGCTGT GTCATAGCTG (2) GTGCTGCCAA (2) TGTTCAATCA 24.8 0.0248 P4.5 retina ACCCTGCAGT GCAGTTCACA GTCATAGCTG (2) TGTTCAATCA TGTTCATCAA 37.7 0.0377 P6.5 retina ACCCTGCAGT ACCCTGCTGT GCAGTTCACA GTCATAGCTG (2) TACAGTGACT (2) TGTTCAATCA TGTTCATCAA 30.1 0.0301 P10.5 crx- retina ACCCTGCAGT ACCCTGCTGT GTGCCTGCCA TGTTCAATCA 29.8 0.0298 P10.5 crx+ retina ACCCTGCAGT ACCCTGCTGT GCAGTTCACA TGTTCAATCA 30.8 0.0308 Adult retinal ACCCTGCAGT ACCCTGCTGT GTCATAGCTG (2) TACAGTGACT (2) TATTTCACAA TGTTCAATCA 37.2 0.0372 ONL GCAGTTCACA GTCATAGCTG (2) TGTTCAATCA 15.2 0.0152