| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | AAGGTCTATT CTGCTGGTGG (2) GGAAACAGTG GGCTGAGAAC
| 29.4 | 0.0294 |
| Cb medulloblastoma | CTGCTGGTGG (2) GGAAACAGTG TGGCAGGTGT
| 43.9 | 0.0439 |
| P8 GC+1d culture | CTGCTGGTGG (2) GGAAACAGTG TGGCAGGTGT
| 60.5 | 0.0605 |
| P8 GC+SHH+1d culture | AAGGTCTATT CTGCTGGTGG (2) GGAAACAGTG GGCTGAGAAC
| 43.3 | 0.0433 |
| 3T3 fibroblasts | CTGCTGGTGG (2)
| 59.6 | 0.0596 |
| E15 cortex | CTGCTGGTGG (2) GGAAACAGTG GGCTGAGAAC
| 39.6 | 0.0396 |
| P1 cortex | CTGCTGGTGG (2) GGAAACAGTG TGGCAGGTGT
| 27.2 | 0.0272 |
| Hypothalamus | AAGGTCTATT CTGCTGGTGG (2)
| 9 | 0.009 |
| E12.5 retina | GGCTGAGAAC TGGCAGGTGT
| 5.7 | 0.0057 |
| E14.5 retina | AAGGTCTATT CTGCTGGTGG (2) GGCTGAGAAC
| 5.4 | 0.0054 |
| E16.5 retina | TGGCAGGTGT
| 1.8 | 0.0018 |
| E18.5 retina | AAGGTCTATT CTGCTGGTGG (2) GGAAACAGTG
| 9 | 0.009 |
| P0.5 retina | CTGCTGGTGG (2) GGAAACAGTG TGGCAGGTGT
| 15.7 | 0.0157 |
| P2.5 retina | AAGGTCTATT CTGCTGGTGG (2) GGAAACAGTG GGCTGAGAAC TGGCAGGTGT
| 14.2 | 0.0142 |
| P4.5 retina | AAGGTCTATT CTGCTGGTGG (2) GGAAACAGTG GGCTGAGAAC
| 14 | 0.014 |
| P6.5 retina | CTGCTGGTGG (2) GGAAACAGTG GGCTGAGAAC TGGCAGGTGT
| 21.7 | 0.0217 |
| P10.5 crx- retina | AAGGTCTATT CTGCTGGTGG (2) GGAAACAGTG TAAAACTAAA TGGCAGGTGT
| 24.2 | 0.0242 |
| P10.5 crx+ retina | AAGGTCTATT CTGCTGGTGG (2) GGAAACAGTG TGGCAGGTGT
| 19.1 | 0.0191 |
| Adult retinal | AAGGTCTATT CTGCTGGTGG (2) GGAAACAGTG GGCTGAGAAC
| 27.9 | 0.0279 |
| ONL | CTGCTGGTGG (2) GGAAACAGTG GGCTGAGAAC TAAAACTAAA
| 21.1 | 0.0211 |