Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.34775	Pdha1	pyruvate dehydrogenase E1 alpha 1	X	X 66.5 cM	18597
Gene Ontology	extracellular space | glycolysis | metabolism | mitochondrion | oxidoreductase activity | oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor | pyruvate dehydrogenase (acetyl-transferring) activity | pyruvate dehydrogenase activity
Human Homolog	PDHA1[pyruvate dehydrogenase (lipoamide) alpha 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 72 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAAACAAGCC ACATTTCTGT (2) GAAAAAAATA (3) TGCTGTGAAA (2) 27.7 0.0277 Cb medulloblastoma AAAACAAGCC ACATTTCTGT (2) TGCTGTGAAA (2) 55.5 0.0555 P8 GC+1d culture AAAACAAGCC ACATTTCTGT (2) TATGGAAAAT TCCTGATCAA TGCTGTGAAA (2) TGTTTTCAAA 36.4 0.0364 P8 GC+SHH+1d culture AAAACAAGCC ACATTTCTGT (2) CAGTTTGTAA CAGTTTGTAC (3) TGCTGTGAAA (2) TGTTTTCAAA 37.4 0.0374 3T3 fibroblasts AAAACAAGCC ACATTTCTGT (2) TGCTGTGAAA (2) 14 0.014 E15 cortex TGCTGTGAAA (2) 9.9 0.0099 P1 cortex ACATTTCTGT (2) TGCTGTGAAA (2) 31.8 0.0318 Hypothalamus AAAACAAGCC ACATTTCTGT (2) CAGTTTGTAC (3) TGCTGTGAAA (2) 70.6 0.0706 E12.5 retina AAAACAAGCC TGCTGTGAAA (2) 15.1 0.0151 E14.5 retina AAAACAAGCC TGCTGTGAAA (2) 21.9 0.0219 E16.5 retina ACATTTCTGT (2) CAGTTTGTAC (3) GAAAAAAATA (3) TGCTGTGAAA (2) 16.2 0.0162 E18.5 retina AAAACAAGCC ACATTTCTGT (2) GAAAAAAATA (3) TGCTGTGAAA (2) 32.7 0.0327 P0.5 retina AAAACAAGCC ACATTTCTGT (2) TGCTGTGAAA (2) 17.6 0.0176 P2.5 retina AAAACAAGCC TGCTGTGAAA (2) 10.5 0.0105 P4.5 retina AAAACAAGCC ACATTTCTGT (2) TATGGAAAAT TCCTGATCAA TGCTGTGAAA (2) TGTTTTCAAA 29.8 0.0298 P6.5 retina AAAACAAGCC ACATTTCTGT (2) CAGTTTGTAC (3) TATGGAAAAT TGCTGTGAAA (2) 23.4 0.0234 P10.5 crx- retina AAAACAAGCC ACATTTCTGT (2) CAGTTTGTAC (3) TGCTGTGAAA (2) 35.4 0.0354 P10.5 crx+ retina AAAACAAGCC ACATTTCTGT (2) CAGTTTGTAC (3) TGCTGTGAAA (2) 42.3 0.0423 Adult retinal AAAACAAGCC ACATTTCTGT (2) CAGTTTGTAC (3) TGCTGTGAAA (2) 18.6 0.0186 ONL AAAACAAGCC TGCTGTGAAA (2) TGTTTTCAAA 17.2 0.0172