| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | CCTCTGGTCT GGAAGAAGAA (2)
| 6.5 | 0.0065 |
| Cb medulloblastoma | AAAAAAAAAT (2) CCTCTGGTCT GGAAGAAGAA (2) TTCTGATTTT
| 20.7 | 0.0207 |
| P8 GC+1d culture | AAAAAAAAAT (2) CCTCTGGTCT GGAAGAAGAA (2) TTCTGATTTT
| 10.2 | 0.0102 |
| P8 GC+SHH+1d culture | AAAAAAAAAT (2) AAATATTAAG CCTCTGGTCT GGAAGAAGAA (2) TTCTGATTTT
| 23.4 | 0.0234 |
| P1 cortex | AAAAAAAAAT (2)
| 9.1 | 0.0091 |
| Hypothalamus | AAATATTAAG GGAAGAAGAA (2)
| 5.4 | 0.0054 |
| E12.5 retina | GGAAGAAGAA (2)
| 3.8 | 0.0038 |
| E14.5 retina | AAAAAAAAAT (2) AAATATTAAG GGAAGAAGAA (2)
| 9.1 | 0.0091 |
| E16.5 retina | AAAAAAAAAT (2) AAATATTAAG CCTCTGGTCT GGAAGAAGAA (2)
| 12.6 | 0.0126 |
| E18.5 retina | AAAAAAAAAT (2) GGAAGAAGAA (2)
| 14.6 | 0.0146 |
| P0.5 retina | AAAAAAAAAT (2) GGAAGAAGAA (2)
| 5.9 | 0.0059 |
| P2.5 retina | AAAAAAAAAT (2) GGAAGAAGAA (2) TTCTGATTTT
| 12.3 | 0.0123 |
| P4.5 retina | AAAAAAAAAT (2) GGAAGAAGAA (2)
| 13.9 | 0.0139 |
| P6.5 retina | GGAAGAAGAA (2)
| 8.3 | 0.0083 |
| P10.5 crx- retina | AAAAAAAAAT (2) GGAAGAAGAA (2) TGTCTTACAA (2)
| 13 | 0.013 |
| P10.5 crx+ retina | CCTCTGGTCT GGAAGAAGAA (2) TGTCTTACAA (2)
| 7.6 | 0.0076 |
| Adult retinal | AAAAAAAAAT (2) TGTCTTACAA (2)
| 11.2 | 0.0112 |
| ONL | AAAAAAAAAT (2) GGAAGAAGAA (2) TGTCTTACAA (2)
| 9.5 | 0.0095 |