Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.3667	Vtn	vitronectin	11	11 B3 (11 45.09 cM)	22370
Gene Ontology	cell adhesion | extracellular space | heparin binding | protein binding
Human Homolog	VTN[vitronectin (serum spreading factor, somatomedin B, complement S-protein)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

Total 7 In Situ Hybridization Images

Images -- Click to Enlarge

SAGE Tags

Total 37 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GTGTGCCAGG (2) TTGATGCAGG (3) 3.2 0.0032 Cb medulloblastoma CTGCCTTCAC GAGCAGTGCA TTGATGCAGG (3) 6.9 0.0069 P8 GC+1d culture CTGCCTTCAC GGGTGCCAGG GTGGGCCCAG GTGTGCCAGG (2) 7.9 0.0079 P8 GC+SHH+1d culture GAGCAGTGCA GAGGAGGGGG (3) GTGTGCCAGG (2) 5.9 0.0059 3T3 fibroblasts TTGATGCAGG (3) 3.5 0.0035 E15 cortex GTCAGCAAAA 4.9 0.0049 Hypothalamus GAGCAGTGCA GAGGAGGGGG (3) GGGTGCCAGG GTGTGCCAGG (2) 9 0.009 E12.5 retina CTGCCTTCAC GTCAGCAAAA GTGTGCCAGG (2) 5.7 0.0057 E14.5 retina GAGCAGTGCA GAGGAGGGGG (3) 3.6 0.0036 E16.5 retina GAGCAGTGCA TTGATGCAGG (3) 5.4 0.0054 P0.5 retina CTGCCTTCAC GGGTGCCAGG GTGTGCCAGG (2) 7.9 0.0079 P4.5 retina GTGGGCCCAG 2 0.002 P6.5 retina GTGGGCCCAG 1.7 0.0017 P10.5 crx- retina GTCAGCAAAA 3.7 0.0037 P10.5 crx+ retina GGGTGCCAGG 1.9 0.0019 Adult retinal CTGCCTTCAC GTCAGCAAAA GTGTGCCAGG (2) 85.2 0.0852 ONL GAGGAGGGGG (3) GTGTGCCAGG (2) 40.3 0.0403