Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.368	Psmb4	proteasome (prosome, macropain) subunit, beta type 4	3	3 43.1 cM	19172
Gene Ontology	cytosol | endopeptidase activity | hydrolase activity | nucleus | peptidase activity | proteasome complex (sensu Eukarya) | proteasome core complex (sensu Eukarya) | ubiquitin-dependent protein catabolism
Human Homolog	PSMB4[proteasome (prosome, macropain) subunit, beta type, 4]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 85 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AGAGTGCTGT AGGCCGCTGG (3) ATCAGTGGCT CTTGGTGTAG GAAAGGGCTG 32.7 0.0327 Cb medulloblastoma ATCAGTGGCT CCTGACTGAG (4) CTTGGTGTAG GAAAGGGCTG 18.5 0.0185 P8 GC+1d culture AGGCCGCTGG (3) ATCAAGGGGG ATCAGTGGCT CCTGACTGAG (4) GAAAGGGCTG 38.7 0.0387 P8 GC+SHH+1d culture AGAGTGCTGT AGGCCGCTGG (3) ATCAGTGGCT CCTGACTGAG (4) CTGGGCTCCT (2) GAAAGGGCTG 43.2 0.0432 3T3 fibroblasts AGGCCGCTGG (3) ATCAGTGGCT CTGGGCTCCT (2) GAAAGGGCTG 28 0.028 E15 cortex AGGCCGCTGG (3) ATCAGTGGCT CCTGACTGAG (4) 19.7 0.0197 P1 cortex GAAAGGGCTG 18.2 0.0182 Hypothalamus AGAGTGCTGT ATCAGTGGCT GAAAGGGCTG TGAGCGATGT 19.9 0.0199 E12.5 retina AGGCCGCTGG (3) ATCAGTGGCT CCTGACTGAG (4) CTGGGCTCCT (2) GAAAGGGCTG 24.5 0.0245 E14.5 retina ATCAAGGGGG ATCAGTGGCT CCTGACTGAG (4) GAAAGGGCTG 23.7 0.0237 E16.5 retina ATCAAGGGGG ATCAGTGGCT CTGGGCTCCT (2) GAAAGGGCTG TGAGCGATGT 36.2 0.0362 E18.5 retina AGGCCGCTGG (3) ATCAAGGGGG ATCAGTGGCT 27.2 0.0272 P0.5 retina AGAGTGCTGT AGGCCGCTGG (3) ATCAGTGGCT CCTGACTGAG (4) CTGGGCTCCT (2) GAAAGGGCTG TGAGCGATGT 51.1 0.0511 P2.5 retina ATCAGTGGCT CTGGGCTCCT (2) GAAAGGGCTG TGAGCGATGT 31.8 0.0318 P4.5 retina AGGCCGCTGG (3) ATCAAGGGGG ATCAGTGGCT GAAAGGGCTG TGAGCGATGT 17.9 0.0179 P6.5 retina ATCAAGGGGG ATCAGTGGCT GAAAGGGCTG 23.4 0.0234 P10.5 crx- retina ATCAGTGGCT CCTGACTGAG (4) CTTGGTGTAG GAAAGGGCTG 59.4 0.0594 P10.5 crx+ retina AGAGTGCTGT ATCAGTGGCT CCTGACTGAG (4) GAAAGGGCTG TGAGCGATGT 40.4 0.0404 Adult retinal AGGCCGCTGG (3) ATCAGTGGCT CTGGGCTCCT (2) GAAAGGGCTG TGAGCGATGT 26.1 0.0261 ONL ATCAGTGGCT CCTGACTGAG (4) GAAAGGGCTG 30.6 0.0306