Mouse Retina SAGE Library    [Home]    [Libraries]    [Images]
Gene:              Accession:    
e.g., Rho or Rhodopsin e.g., BG297543 batch search
Tag:        Cytoband (Mm):    
e.g., CCCAGTTCAC e.g., 6 E3
Unigene:        Cytoband (Hs):    
e.g., Mm.2965 batch search e.g., 3q21-q24

 UniGene  Symbol  Name  Chr  Cytoband  LocusLink 
 Mm.37371 Plod1procollagen-lysine, 2-oxoglutarate 5-dioxygenase 1 4  4 76.5 cM  18822 
 Gene Ontology endoplasmic reticulum | extracellular space | membrane | oxidoreductase activity | oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors | oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen | procollagen-lysine 5-dioxygenase activity | protein metabolism
 Human Homolog PLOD[procollagen-lysine, 2-oxoglutarate 5-dioxygenase (lysine hydroxylase, Ehlers-Danlos syndrome type VI)]
 Clusters 
   Neighbors    

No In Situ Hybridization images could be found.



SAGE Tags

Total 60 tags found with positive counts.

  all tags    reliable tags    sum by library with all tags    sum by library with reliable tags  
 Library  Tag (Other Genes)  Normalized Count  % in library 
P8 Cb GCCCCCTCCCCA
GAATAAAGAG (3)
GCTTCTTCTG (4)
GTGCTCCCAC
TTCCTGACAC
37.50.0375
Cb medulloblastomaCCCCTCCCCA
GAATAAAGAG (3)
GCTTCTTCTG (4)
TTCCTGACAC
43.90.0439
P8 GC+1d cultureCCCCTCCCCA
GAATAAAGAG (3)
GCTTCTTCTG (4)
GGCAGCCCCA (2)
TTCCTGACAC
23.90.0239
P8 GC+SHH+1d cultureCCCCTCCCCA
GAATAAAGAG (3)
GCTTCTTCTG (4)
GTGCTCCCAC
TTCCTGACAC
29.30.0293
3T3 fibroblastsGCTTCTTCTG (4)
GTGCTCCCAC
140.014
E15 cortexGCTTCTTCTG (4)
GGCAGCCCCA (2)
9.80.0098
P1 cortexGAATAAAGAG (3)
GCTTCTTCTG (4)
13.60.0136
HypothalamusGAATAAAGAG (3)
GCTTCTTCTG (4)
10.80.0108
E12.5 retinaGAATAAAGAG (3)
GCTTCTTCTG (4)
300.03
E14.5 retinaGAATAAAGAG (3)
GCTTCTTCTG (4)
23.70.0237
E16.5 retinaGAATAAAGAG (3)
GCTTCTTCTG (4)
TTCCTGACAC
25.40.0254
E18.5 retinaGAATAAAGAG (3)
GCTTCTTCTG (4)
38.20.0382
P0.5 retinaGAATAAAGAG (3)
GCTTCTTCTG (4)
11.80.0118
P2.5 retinaGAATAAAGAG (3)
GCTTCTTCTG (4)
35.20.0352
P4.5 retinaGAATAAAGAG (3)
GCTTCTTCTG (4)
49.50.0495
P6.5 retinaCCCCTCCCCA
GAATAAAGAG (3)
GCTTCTTCTG (4)
GTGCTCCCAC
38.40.0384
P10.5 crx- retinaCCCCTCCCCA
GAATAAAGAG (3)
GCTTCTTCTG (4)
7.50.0075
P10.5 crx+ retinaCCCCTCCCCA
GAATAAAGAG (3)
GCTTCTTCTG (4)
GGCAGCCCCA (2)
28.90.0289
Adult retinalGAATAAAGAG (3)
GCTTCTTCTG (4)
GTGCTCCCAC
TTCCTGACAC
9.40.0094
ONLCCCCTCCCCA
GAATAAAGAG (3)
GCTTCTTCTG (4)
11.50.0115