Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.37516	Dnajb11	DnaJ (Hsp40) homolog, subfamily B, member 11	16		67838
Gene Ontology	chaperone activity | co-chaperonin activity | cytoplasm | cytoplasm | endoplasmic reticulum | mRNA editing | mRNA editing | nucleus | nucleus | protein binding | protein binding | protein folding
Human Homolog	DNAJB11[DnaJ (Hsp40) homolog, subfamily B, member 11]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 55 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AATTAAAGTT (2) CTGTGTGGCC (2) GGGAAGTCTG 35.9 0.0359 Cb medulloblastoma CTGTGTGGCC (2) GGGAAGTCTG 9.2 0.0092 P8 GC+1d culture AATTAAAGTT (2) CTGTGTGGCC (2) GGGAAGTCTG GTTGGGGGAG (2) TGGATGGGGA 33.1 0.0331 P8 GC+SHH+1d culture AATTAAAGTT (2) CTGTGTGGCC (2) GGGAAGTCTG TGGATGGGGA 25.8 0.0258 3T3 fibroblasts CTGTGTGGCC (2) GGGAAGTCTG TGGATGGGGA 63.1 0.0631 E15 cortex GGGAAGTCTG 4.9 0.0049 P1 cortex AATTAAAGTT (2) GGGAAGTCTG 9 0.009 Hypothalamus GGGAAGTCTG TGGATGGGGA 3.6 0.0036 E12.5 retina GTTGGGGGAG (2) 1.9 0.0019 E14.5 retina AATTAAAGTT (2) GGGAAGTCTG TGGATGGGGA 9 0.009 E16.5 retina AATTAAAGTT (2) CTGTGTGGCC (2) 5.4 0.0054 E18.5 retina AATTAAAGTT (2) GGGAAGTCTG 7.2 0.0072 P0.5 retina CTGTGTGGCC (2) GGGAAGTCTG GTTGGGGGAG (2) TGGATGGGGA 11.9 0.0119 P2.5 retina AATTAAAGTT (2) CTGTGTGGCC (2) GGGAAGTCTG TGGATGGGGA 21.1 0.0211 P4.5 retina AATTAAAGTT (2) CTGTGTGGCC (2) 4 0.004 P6.5 retina AATTAAAGTT (2) CTGTGTGGCC (2) GGGAAGTCTG GTTGGGGGAG (2) TGGATGGGGA 15.1 0.0151 P10.5 crx- retina AATTAAAGTT (2) CTGTGTGGCC (2) GGGAAGTCTG 68.8 0.0688 P10.5 crx+ retina CTGTGTGGCC (2) GGGAAGTCTG GTTGGGGGAG (2) 34.6 0.0346 Adult retinal GGGAAGTCTG 5.6 0.0056 ONL AATTAAAGTT (2) GGGAAGTCTG TGGATGGGGA 11.5 0.0115