| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | AAATACTTGT AGGGAGAGGA GCTTCCCCAG GTGAAGGCAG
| 24.5 | 0.0245 |
| P8 GC+1d culture | AAATACTTGT AGGGAGAGGA GTGAAGGCAG
| 11.3 | 0.0113 |
| P8 GC+SHH+1d culture | AAATACTTGT AGGGAGAGGA GGGGGGGGGC (2) GTGAAGGCAG
| 8.2 | 0.0082 |
| 3T3 fibroblasts | GTCATAGCTG (2)
| 10.5 | 0.0105 |
| E15 cortex | AGGGAGAGGA GCTTCCCCAG GTCATAGCTG (2) TGGCTAACCC
| 24.6 | 0.0246 |
| P1 cortex | AAATACTTGT
| 4.5 | 0.0045 |
| Hypothalamus | AAATTAATTT (2) AGGGAGAGGA
| 3.6 | 0.0036 |
| E12.5 retina | AAATACTTGT GGGGGGGGGC (2)
| 7.5 | 0.0075 |
| E14.5 retina | AAATACTTGT AGGGAGAGGA
| 23.7 | 0.0237 |
| E16.5 retina | AGGGAGAGGA
| 7.2 | 0.0072 |
| E18.5 retina | AAATACTTGT AGGGAGAGGA GGGGGGGGGC (2)
| 5.4 | 0.0054 |
| P0.5 retina | AAATACTTGT AGGGAGAGGA GTCATAGCTG (2) TGGCTAACCC
| 13.7 | 0.0137 |
| P2.5 retina | AAATACTTGT GTCATAGCTG (2)
| 5.3 | 0.0053 |
| P4.5 retina | AGGGAGAGGA GCTTCCCCAG GTCATAGCTG (2)
| 6 | 0.006 |
| P6.5 retina | AAATACTTGT AAATTAATTT (2) AGGGAGAGGA GTCATAGCTG (2) TGGCTAACCC
| 13.3 | 0.0133 |
| P10.5 crx- retina | AAATTAATTT (2) AGGGAGAGGA
| 3.8 | 0.0038 |
| Adult retinal | AAATACTTGT GTCATAGCTG (2)
| 3.8 | 0.0038 |
| ONL | AAATACTTGT GGGGGGGGGC (2) GTCATAGCTG (2)
| 9.5 | 0.0095 |