Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.3868	Yy1	YY1 transcription factor	12	12 53.0 cM	22632
Gene Ontology	DNA binding | nucleic acid binding | nucleus | regulation of transcription, DNA-dependent | transcription factor activity | transcription factor complex | zinc ion binding
Human Homolog	YY1[YY1 transcription factor]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 70 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAACAGTGGT AACTTCGCAT CATACTTCAA TAACTGCCCA TTTTGATAAA (3) 8 0.008 Cb medulloblastoma GCTCTATACA 6.9 0.0069 P8 GC+1d culture GCTCTATACA GTGAGGCCTC TAACTGCCCA TAGAATCAAA 6.8 0.0068 P8 GC+SHH+1d culture AACTTCGCAT GCTCTATACA GTGAGGCCTC TAACTGCCCA TAGAATCAAA TGTGACCTCT (2) TTTGGATAAA 17.7 0.0177 3T3 fibroblasts GTGAGGCCTC 3.5 0.0035 E15 cortex AAACAGTGGT GTGAGGCCTC TAGAATCAAA 14.7 0.0147 P1 cortex TAACTGCCCA TAGAATCAAA TGTGACCTCT (2) TTTTGATAAA (3) 18 0.018 Hypothalamus AACTTCGCAT GCTCTATACA GTGAGGCCTC TAGAATCAAA 12.6 0.0126 E12.5 retina AACTTCGCAT GCTCTATACA TAACTGCCCA TAGAATCAAA 13.2 0.0132 E14.5 retina AAACAGTGGT GCTCTATACA TAGAATCAAA TGTGACCTCT (2) 12.7 0.0127 E16.5 retina ATTCAATACA (2) GCTCTATACA TTTTGATAAA (3) 9 0.009 E18.5 retina ATTCAATACA (2) GCTCTATACA TGTGACCTCT (2) TTTTGATAAA (3) 7.2 0.0072 P0.5 retina GCTCTATACA GTGAGGCCTC 4 0.004 P2.5 retina GCTCTATACA TGTGACCTCT (2) TTTTGATAAA (3) 17.7 0.0177 P4.5 retina ATTCAATACA (2) GCTCTATACA GTGAGGCCTC TAACTGCCCA TAGAATCAAA TGTGACCTCT (2) 17.9 0.0179 P6.5 retina GCTCTATACA TAGAATCAAA TGTGACCTCT (2) 11.6 0.0116 P10.5 crx- retina GCTCTATACA TAGAATCAAA 3.8 0.0038 P10.5 crx+ retina CATACTTCAA GCTCTATACA TTTGGATAAA 11.5 0.0115 Adult retinal AACTTCGCAT CATACTTCAA TGTGACCTCT (2) TTTTGATAAA (3) 9.4 0.0094 ONL GCTCTATACA TAACTGCCCA TGTGACCTCT (2) 9.5 0.0095