| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | AAAAAAAAAA (2) GACTTCCAGG (2)
| 208.8 | 0.2088 |
| Cb medulloblastoma | AAAAAAAAAA (2) GACTTCCAGG (2)
| 802.4 | 0.8024 |
| P8 GC+1d culture | AAAAAAAAAA (2) GACTTCCAGG (2)
| 205.4 | 0.2054 |
| P8 GC+SHH+1d culture | AAAAAAAAAA (2) GACTTCCAGG (2) GGTCAAAAAA
| 282.2 | 0.2822 |
| 3T3 fibroblasts | AAAAAAAAAA (2)
| 28 | 0.028 |
| E15 cortex | AAAAAAAAAA (2) GACTTCCAGG (2) GGTCAAAAAA
| 232.5 | 0.2325 |
| P1 cortex | AAAAAAAAAA (2) TGAACAACTT
| 259 | 0.259 |
| Hypothalamus | AAAAAAAAAA (2) GACTTCCAGG (2) TGAACAACTT
| 126.8 | 0.1268 |
| E12.5 retina | AAAAAAAAAA (2)
| 138.9 | 0.1389 |
| E14.5 retina | AAAAAAAAAA (2) GACTTCCAGG (2) GGTCAAAAAA
| 102 | 0.102 |
| E16.5 retina | AAAAAAAAAA (2) GACTTCCAGG (2)
| 54.4 | 0.0544 |
| E18.5 retina | AAAAAAAAAA (2) GACTTCCAGG (2) GGTCAAAAAA TGAACAACTT
| 385.6 | 0.3856 |
| P0.5 retina | AAAAAAAAAA (2) GACTTCCAGG (2)
| 123.7 | 0.1237 |
| P2.5 retina | AAAAAAAAAA (2) GACTTCCAGG (2)
| 344.9 | 0.3449 |
| P4.5 retina | AAAAAAAAAA (2) GACTTCCAGG (2) GGTCAAAAAA
| 299.2 | 0.2992 |
| P6.5 retina | AAAAAAAAAA (2) GACTTCCAGG (2)
| 276.8 | 0.2768 |
| P10.5 crx- retina | AAAAAAAAAA (2) GACTTCCAGG (2)
| 72.5 | 0.0725 |
| P10.5 crx+ retina | AAAAAAAAAA (2) GACTTCCAGG (2)
| 103.8 | 0.1038 |
| Adult retinal | AAAAAAAAAA (2) GACTTCCAGG (2)
| 70.4 | 0.0704 |
| ONL | AAAAAAAAAA (2) GACTTCCAGG (2)
| 109.1 | 0.1091 |