Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.3973	Stx8	syntaxin 8	11		55943
Mm.3973	Ntn1	netrin 1	11		18208
Mm.3973	C78197	expressed sequence C78197	11		97702
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 79 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC ATAGAACTAA (3) GAAAAAAAAA (2) GCAGAAAGCA (3) TAGGGCCCAC (3) 62 0.062 Cb medulloblastoma ATAGAACTAA (3) ATGGTGTCAG (2) ATGTGATTGC (4) GAAAAAAAAA (2) GCCCCGGACC (3) GTGATTTTAT (3) TAGGGCCCAC (3) TGTAATTTCC 210.2 0.2102 P8 GC+1d culture AGCACACAGA (2) ATAGAACTAA (3) GAAAAAAAAA (2) GCAGAAAGCA (3) GCCATCTGAG (4) GTGATTTTAT (3) TAGGGCCCAC (3) TGTAATTTCC 66.1 0.0661 P8 GC+SHH+1d culture ATAGAACTAA (3) GAAAAAAAAA (2) GCAGAAAGCA (3) GTGATTTTAT (3) TAGGGCCCAC (3) TGTAATTTCC 96 0.096 3T3 fibroblasts TAGGGCCCAC (3) 3.5 0.0035 E15 cortex GAAAAAAAAA (2) 54.4 0.0544 P1 cortex GAAAAAAAAA (2) GTGATTTTAT (3) 50 0.05 Hypothalamus AGCACACAGA (2) ATGGTGTCAG (2) GAAAAAAAAA (2) GCAGAAAGCA (3) 72.4 0.0724 E12.5 retina AGCACACAGA (2) ATGTGATTGC (4) GAAAAAAAAA (2) GCAGAAAGCA (3) 54.5 0.0545 E14.5 retina GAAAAAAAAA (2) 34.6 0.0346 E16.5 retina GAAAAAAAAA (2) GCAGAAAGCA (3) GCCATCTGAG (4) GCCCCGGACC (3) TGTAATTTCC 30.7 0.0307 E18.5 retina ATGTGATTGC (4) GAAAAAAAAA (2) GCAGAAAGCA (3) GCCATCTGAG (4) 74.5 0.0745 P0.5 retina GAAAAAAAAA (2) GCAGAAAGCA (3) TGTAATTTCC 41.2 0.0412 P2.5 retina GAAAAAAAAA (2) GCAGAAAGCA (3) TGTAATTTCC 93.3 0.0933 P4.5 retina GAAAAAAAAA (2) GCAGAAAGCA (3) GCCATCTGAG (4) GTGATTTTAT (3) 71.4 0.0714 P6.5 retina GAAAAAAAAA (2) GCAGAAAGCA (3) GCCATCTGAG (4) GTGATTTTAT (3) 68.4 0.0684 P10.5 crx- retina ATGTGATTGC (4) GAAAAAAAAA (2) GCAGAAAGCA (3) GTGATTTTAT (3) TGTAATTTCC 37.2 0.0372 P10.5 crx+ retina AGCACACAGA (2) ATGTGATTGC (4) GAAAAAAAAA (2) GTGATTTTAT (3) 48 0.048 Adult retinal GAAAAAAAAA (2) GCCATCTGAG (4) GTGATTTTAT (3) 20.5 0.0205 ONL GAAAAAAAAA (2) GCAGAAAGCA (3) GCCATCTGAG (4) GCCCCGGACC (3) TGTAATTTCC 38.2 0.0382