| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | AATTTTAAAA (3) CAGAAAATAG GAAGTCAAAA GAAGTCAATA GACGAGATTC (2) TGAAAAAAAA (2) TGGAAAAAAA (4) TGGCCCAAAA (2) TGGGAAAAAA
| 57.1 | 0.0571 |
| Cb medulloblastoma | GAAGTCAAAA GAAGTCAATA GACGAGATTC (2) TGAAAAAAAA (2) TGGAAAAAAA (4) TGGGAAAAAA
| 154.8 | 0.1548 |
| P8 GC+1d culture | AATTTTAAAA (3) CAGAAAATAG GAAGTCAAAA GAAGTCAATA GACGAGATTC (2) GCCTCCAGGG TGAAAAAAAA (2) TGGAAAAAAA (4) TGGCCCAAAA (2) TGGGAAAAAA
| 63.9 | 0.0639 |
| P8 GC+SHH+1d culture | AATTTTAAAA (3) GAAGTCAAAA GAAGTCAATA GACGAGATTC (2) TGAAAAAAAA (2) TGGAAAAAAA (4) TGGCCCAAAA (2) TGGGAAAAAA
| 98.4 | 0.0984 |
| 3T3 fibroblasts | GCCTCCAGGG TGAAAAAAAA (2) TGGCCCAAAA (2)
| 17.5 | 0.0175 |
| E15 cortex | GAAGTCAAAA GACGAGATTC (2) GCCAAGATCT TGAAAAAAAA (2) TGGAAAAAAA (4) TGGGAAAAAA
| 59.2 | 0.0592 |
| P1 cortex | GAAGTCAAAA GCCAAGATCT TGAAAAAAAA (2) TGGGAAAAAA
| 18 | 0.018 |
| Hypothalamus | GAAGTCAAAA GAAGTCAATA GACGAGATTC (2) TGAAAAAAAA (2) TGGAAAAAAA (4) TGGCCCAAAA (2) TGGGAAAAAA
| 70.5 | 0.0705 |
| E12.5 retina | AATTTTAAAA (3) GAAGTCAAAA GAAGTCAATA GACGAGATTC (2) TGAAAAAAAA (2) TGGAAAAAAA (4)
| 60.1 | 0.0601 |
| E14.5 retina | AATTTTAAAA (3) GAAGTCAAAA GACGAGATTC (2) GCCAAGATCT TGAAAAAAAA (2) TGGAAAAAAA (4) TGGGAAAAAA
| 100.1 | 0.1001 |
| E16.5 retina | GAAGTCAAAA GAAGTCAATA GACGAGATTC (2) GCCAAGATCT TGAAAAAAAA (2) TGGAAAAAAA (4) TGGGAAAAAA
| 43.4 | 0.0434 |
| E18.5 retina | AATTTTAAAA (3) GAAGTCAAAA GAAGTCAATA GACGAGATTC (2) TGAAAAAAAA (2) TGGAAAAAAA (4) TGGGAAAAAA
| 132.8 | 0.1328 |
| P0.5 retina | AATTTTAAAA (3) GAAGTCAAAA GAAGTCAATA GACGAGATTC (2) TGAAAAAAAA (2) TGGAAAAAAA (4) TGGCCCAAAA (2) TGGGAAAAAA
| 53.1 | 0.0531 |
| P2.5 retina | CAGAAAATAG GAAGTCAAAA GAAGTCAATA GACGAGATTC (2) GCCAAGATCT TGAAAAAAAA (2) TGGAAAAAAA (4) TGGCCCAAAA (2) TGGGAAAAAA
| 74 | 0.074 |
| P4.5 retina | AATTTTAAAA (3) GAAGTCAAAA TGAAAAAAAA (2) TGGAAAAAAA (4) TGGCCCAAAA (2) TGGGAAAAAA
| 71.4 | 0.0714 |
| P6.5 retina | AATTTTAAAA (3) GAAGTCAAAA GAAGTCAATA GACGAGATTC (2) GCCTCCAGGG TGAAAAAAAA (2) TGGAAAAAAA (4) TGGGAAAAAA
| 56.7 | 0.0567 |
| P10.5 crx- retina | GAAGTCAAAA GAAGTCAATA GACGAGATTC (2) TGAAAAAAAA (2) TGGAAAAAAA (4) TGGGAAAAAA
| 33.6 | 0.0336 |
| P10.5 crx+ retina | GAAGTCAAAA GAAGTCAATA GACGAGATTC (2) GCCAAGATCT TGAAAAAAAA (2) TGGAAAAAAA (4) TGGCCCAAAA (2)
| 51.9 | 0.0519 |
| Adult retinal | GAAGTCAAAA GACGAGATTC (2) TGAAAAAAAA (2) TGGAAAAAAA (4) TGGGAAAAAA
| 27.9 | 0.0279 |
| ONL | AATTTTAAAA (3) GAAGTCAAAA GACGAGATTC (2) TGAAAAAAAA (2) TGGCCCAAAA (2) TGGGAAAAAA
| 38.2 | 0.0382 |