| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | TACTGTCCAA (4) TTTTGTCCCT
| 3.2 | 0.0032 |
| P8 GC+1d culture | TACTGTCCAA (4) TTTTGTCCCT
| 5.7 | 0.0057 |
| P8 GC+SHH+1d culture | TACTGTCCAA (4)
| 3.5 | 0.0035 |
| 3T3 fibroblasts | GTCATAGCTG (2)
| 10.5 | 0.0105 |
| E15 cortex | GTCATAGCTG (2) TACTGTCCAA (4)
| 9.8 | 0.0098 |
| P1 cortex | TACTGTCCAA (4)
| 4.5 | 0.0045 |
| Hypothalamus | TACTGTCCAA (4) TGCCATTAAG
| 7.2 | 0.0072 |
| E12.5 retina | TACTGTCCAA (4) TGCCATTAAG TTTTGTCCCT
| 13.2 | 0.0132 |
| E14.5 retina | TACTGTCCAA (4)
| 3.6 | 0.0036 |
| E16.5 retina | TACTGTCCAA (4)
| 3.6 | 0.0036 |
| E18.5 retina | TTTTGTCCCT
| 1.8 | 0.0018 |
| P0.5 retina | GTCATAGCTG (2) TACTGTCCAA (4) TTTTGTCCCT
| 9.8 | 0.0098 |
| P2.5 retina | GTCATAGCTG (2) TACTGTCCAA (4)
| 5.3 | 0.0053 |
| P4.5 retina | GTCATAGCTG (2) TACTGTCCAA (4) TTTTGTCCCT
| 6 | 0.006 |
| P6.5 retina | GTCATAGCTG (2) TACTGTCCAA (4)
| 8.3 | 0.0083 |
| P10.5 crx- retina | TACTGTCCAA (4) TTTTGTCCCT
| 9.3 | 0.0093 |
| P10.5 crx+ retina | TACTGTCCAA (4)
| 7.7 | 0.0077 |
| Adult retinal | GTCATAGCTG (2) TACTGTCCAA (4)
| 3.8 | 0.0038 |
| ONL | GTCATAGCTG (2) TACTGTCCAA (4)
| 7.6 | 0.0076 |