Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.41665	Grina	glutamate receptor, ionotropic, N-methyl D-asparate-associated protein 1 (glutamate binding)	15		66168
Gene Ontology	integral to membrane | receptor activity
Human Homolog	GRINA[glutamate receptor, ionotropic, N-methyl D-asparate-associated protein 1 (glutamate binding)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 58 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GCTCCAGCCC (2) TTCAGGGAGA (2) TTTCAAGGGA 13 0.013 Cb medulloblastoma ACATCCTCTC GCCCCCTTTA GCTCCAGCCC (2) TTTCAAGGGA 48.5 0.0485 P8 GC+1d culture GCCCCCTTTA GGAACTACCA TTTCAAGGGA 36.4 0.0364 P8 GC+SHH+1d culture TTTCAAAGGG TTTCAAGGGA 24.6 0.0246 3T3 fibroblasts TTTCAAGGGA 14 0.014 E15 cortex GCTGCTCCTG TTCAGGGAGA (2) TTTCAAGGGA 14.7 0.0147 P1 cortex TTTCAAGGGA 22.7 0.0227 Hypothalamus AGCCCTGTCT GCCCCCTTTA GCTCCAGCCC (2) TTTCAAGGGA 45.2 0.0452 E12.5 retina TTCAGGGAGA (2) TTTCAAGGGA 22.6 0.0226 E14.5 retina ACATCCTCTC GACCAAGGAG GCTCCAGCCC (2) TTTCAAGGGA 36.4 0.0364 E16.5 retina GCTCCAGCCC (2) TTTCAAGGGA 45.3 0.0453 E18.5 retina GACCAAGGAG TTTCAAGGGA 14.5 0.0145 P0.5 retina AGCCCTGTCT TTTCAAGGGA 19.7 0.0197 P2.5 retina GACCAAGGAG TTCAGGGAGA (2) TTTCAAGGGA 72.2 0.0722 P4.5 retina GACCAAGGAG TTTCAAAGGG TTTCAAGGGA 81.3 0.0813 P6.5 retina GACCAAGGAG GCTGCTCCTG GGAACTACCA TTCAGGGAGA (2) TTTCAAGGGA 133.5 0.1335 P10.5 crx- retina ACATCCTCTC GCCCCCTTTA TTCAGGGAGA (2) TTTCAAGGGA 107.8 0.1078 P10.5 crx+ retina AGCCCTGTCT TTTCAAGGGA 75 0.075 Adult retinal ACATCCTCTC GCTCCAGCCC (2) TTTCAAAGGG TTTCAAGGGA 87.1 0.0871 ONL GCTCCAGCCC (2) GCTGCTCCTG GGAACTACCA TTTCAAGGGA 84.2 0.0842