Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.4168	Slc12a2	solute carrier family 12, member 2	18	18 32.0 cM	20496
Gene Ontology	amino acid transport | amino acid-polyamine transporter activity | basolateral plasma membrane | carrier activity | cation:chloride symporter activity | chloride transport | integral to membrane | integral to plasma membrane | ion transport | membrane | potassium ion transport | sodium ion transport | symporter activity | transport | transporter activity
Human Homolog	SLC12A2[solute carrier family 12 (sodium/potassium/chloride transporters), member 2]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 109 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AACTTCAGTG ATGCTTTATA ATGCTTTTGA ATTCCGAATT (2) CCTGGAATTT (4) GTTTTTTTTT (2) TATTTTTTTA (4) TGTATGTGTG (3) TGTGTGTGTG (2) 79.8 0.0798 Cb medulloblastoma ATGCTTTATA CCTGGAATTT (4) GTCCTTGGAG GTTTTTTTTT (2) TGTGTGTGTG (2) 46.2 0.0462 P8 GC+1d culture ATGCTTTTGA CCTGGAATTT (4) GTTTTTTTTT (2) TATTTTTTTA (4) TGCACACGTG (2) TGCTGATAGA (2) TGTATGTGTG (3) TGTGTGTGTG (2) TTACACGTGT 67.1 0.0671 P8 GC+SHH+1d culture CCTGGAATTT (4) GTTTTTTTTT (2) TATTTTTTTA (4) TCTGTATGTG TGTGTGTGTG (2) 72.6 0.0726 3T3 fibroblasts CCTGGAATTT (4) TGTGTGTGTG (2) 31.5 0.0315 E15 cortex AAGAGAGCAG CCTGGAATTT (4) GTCCTTGGAG 64.2 0.0642 P1 cortex CCTGGAATTT (4) TGCACACGTG (2) TGTATGTGTG (3) TGTGTGTGTG (2) 36.3 0.0363 Hypothalamus CCTGGAATTT (4) TGTGTGTGTG (2) 29 0.029 E12.5 retina CCTGGAATTT (4) TGTGTGTGTG (2) 67.6 0.0676 E14.5 retina CCTGGAATTT (4) GTCCTTGGAG GTTTTTTTTT (2) TATTTTTTTA (4) TCTGTATGTG TGTATGTGTG (3) TGTGTGTGTG (2) 109.3 0.1093 E16.5 retina AAGAGAGCAG ATGCTTTATA CCTGGAATTT (4) TCTGTATGTG TGCACACGTG (2) TGTATGTGTG (3) TGTGTGTGTG (2) 74.2 0.0742 E18.5 retina AACTTCAGTG ATGCTTTATA CCTGGAATTT (4) GTTTTTTTTT (2) TGCTGATAGA (2) TGTATGTGTG (3) TGTGTGTGTG (2) 100 0.1 P0.5 retina CCTGGAATTT (4) GTTTTTTTTT (2) TATTTTTTTA (4) TGTGTGTGTG (2) TTACACGTGT 57 0.057 P2.5 retina AAGAGAGCAG CCTGGAATTT (4) TATTTTTTTA (4) TCTGTATGTG TGTGTGTGTG (2) 86.4 0.0864 P4.5 retina ATTCCGAATT (2) CCTGGAATTT (4) GTTTTTTTTT (2) TATTTTTTTA (4) TGTGTGTGTG (2) 97.2 0.0972 P6.5 retina ATTCCGAATT (2) CCTGGAATTT (4) TGCTGATAGA (2) TGTGTGTGTG (2) 66.7 0.0667 P10.5 crx- retina AACTTCAGTG ATGCTTTATA CCTGGAATTT (4) GTTTTTTTTT (2) TGCTGATAGA (2) TGTGTGTGTG (2) 80 0.08 P10.5 crx+ retina AACTTCAGTG ATGCTTTATA CCTGGAATTT (4) GTCCTTGGAG GTTTTTTTTT (2) TCTGTATGTG TGCACACGTG (2) TGCTGATAGA (2) TGTGTGTGTG (2) 76.8 0.0768 Adult retinal AACTTCAGTG CCTGGAATTT (4) TGCACACGTG (2) TGTATGTGTG (3) TGTGTGTGTG (2) TTACACGTGT TTTTTTTTAA 74.2 0.0742 ONL ATGCTTTATA ATTCCGAATT (2) CCTGGAATTT (4) TGCACACGTG (2) TGTATGTGTG (3) TGTGTGTGTG (2) 42.1 0.0421