Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.41758	D16Ium23e	DNA segment, Chr 16, Indiana University Medical 23, expressed	16	16 45.9 cM	28184
Mm.41758	Jam2	junction adhesion molecule 2	16		67374
Gene Ontology	extracellular space | integral to membrane
Human Homolog	JAM2[junctional adhesion molecule 2]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 67 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CAGAAATCAT (3) TTATTAAAAT (3) 13 0.013 Cb medulloblastoma AAGACCTGTC (2) AAGGGAGCTG (2) TTATTAAAAT (3) TTGTACAGGT (2) 16.1 0.0161 P8 GC+1d culture CAGAAATCAT (3) TTATTAAAAT (3) TTGTACAGGT (2) 16 0.016 P8 GC+SHH+1d culture CTATGCTCAG (2) TTATTAAAAT (3) TTGTACAGGT (2) 29.3 0.0293 3T3 fibroblasts CTATGCTCAG (2) GCCAAGGCCT (4) 7 0.007 E15 cortex GCCAAGGCCT (4) TGACAACTGG 9.8 0.0098 P1 cortex GCCAAGGCCT (4) TTATTAAAAT (3) 22.7 0.0227 Hypothalamus AAGACCTGTC (2) TTATTAAAAT (3) 12.7 0.0127 E12.5 retina ACTATTTTTA TTATTAAAAT (3) TTGTACAGGT (2) 26.3 0.0263 E14.5 retina ACTATTTTTA TGACAACTGG TTATTAAAAT (3) 21.9 0.0219 E16.5 retina ACTATTTTTA TTATTAAAAT (3) TTGTACAGGT (2) 18.1 0.0181 E18.5 retina AAGGCATCTC (2) ACTATTTTTA CTATGCTCAG (2) TGCCAAGGCC TTATTAAAAT (3) TTGTACAGGT (2) 39.9 0.0399 P0.5 retina ACTATTTTTA GCCAAGGCCT (4) TTATTAAAAT (3) TTGTACAGGT (2) 11.9 0.0119 P2.5 retina GCCAAGGCCT (4) TGCCAAGGCC TTATTAAAAT (3) TTGTACAGGT (2) 21.2 0.0212 P4.5 retina AAGGCATCTC (2) GCCAAGGCCT (4) TTATTAAAAT (3) TTGTACAGGT (2) 25.8 0.0258 P6.5 retina TGACAACTGG TTATTAAAAT (3) TTGTACAGGT (2) 31.7 0.0317 P10.5 crx- retina AAGGCATCTC (2) TTATTAAAAT (3) TTGTACAGGT (2) 18.6 0.0186 P10.5 crx+ retina AAGGCATCTC (2) AAGGGAGCTG (2) TGCCAAGGCC TTATTAAAAT (3) TTGTACAGGT (2) 21 0.021 Adult retinal AAGGCATCTC (2) AAGGGAGCTG (2) GCCAAGGCCT (4) TTATTAAAAT (3) TTGTACAGGT (2) 20.6 0.0206 ONL AAGACCTGTC (2) AAGGCATCTC (2) TTATTAAAAT (3) TTGTACAGGT (2) 17.2 0.0172