| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | ACAAGACACA GAAAAAGGAA (4) GCTCTGGAGA (3) GTTCCTAGGA (3) TCCCTTCAGA (5) TGGGGTTGGC (2) TTGCATTGCT (4) TTGGGTTTTT (4) TTTTTATTTT (4)
| 45.7 | 0.0457 |
| Cb medulloblastoma | ACAAGACACA GGGCGGGAAG (4) TTGCATTGCT (4) TTGGGTTTTT (4) TTTTTATTTT (4)
| 13.8 | 0.0138 |
| P8 GC+1d culture | CTATGTGGGC (2) GAAATCTGTG (2) GGGCGGGAAG (4) GTTCCTAGGA (3) TTGCATTGCT (4) TTGGGTTTTT (4) TTTTTATTTT (4)
| 31.9 | 0.0319 |
| P8 GC+SHH+1d culture | CTATGTGGGC (2) GAAATCTGTG (2) GGGCGGGAAG (4) GTTCCTAGGA (3) TCCTCCCCTC (3) TTGCAGTGCC TTGCATTGCT (4) TTGGGTTTTT (4) TTTTTATTTT (4)
| 44.4 | 0.0444 |
| 3T3 fibroblasts | CTATGTGGGC (2) TCCCTTCAGA (5) TTGGGTTTTT (4)
| 14 | 0.014 |
| E15 cortex | GCTCTGGAGA (3) TGGGGTTGGC (2) TTGCATTGCT (4) TTGGGTTTTT (4)
| 19.6 | 0.0196 |
| P1 cortex | GAAAAAGGAA (4) GCTTTTAAAA (3) GGAATAAACA (4) TTGCATTGCT (4) TTGGGTTTTT (4)
| 36.3 | 0.0363 |
| Hypothalamus | ACAAGACACA CTATGTGGGC (2) GTTCCTAGGA (3) TTGCATTGCT (4) TTTTTATTTT (4)
| 25.3 | 0.0253 |
| E12.5 retina | TCCTCCCCTC (3) TTCTCAATTA TTGCATTGCT (4) TTGGGTTTTT (4) TTTTTATTTT (4)
| 11.4 | 0.0114 |
| E14.5 retina | ACAAGACACA CTATGTGGGC (2) GGAATAAACA (4) GTTCCTAGGA (3) TCCTCCCCTC (3) TGGGGTTTGG TTGCAGTGCC TTGGGTTTTT (4) TTTTTATTTT (4)
| 30.8 | 0.0308 |
| E16.5 retina | ACAAGACACA CTATGTGGGC (2) GCTTTTAAAA (3) GGGCGGGAAG (4) TTGCAGTGCC TTGCATTGCT (4) TTGGGTTTTT (4) TTTTTATTTT (4)
| 39.7 | 0.0397 |
| E18.5 retina | ACAAGACACA CTATGTGGGC (2) GCTTTTAAAA (3) GGAAGGAGTG (4) TTCTCAATTA TTGCAGTGCC TTGGGTTTTT (4) TTTTTATTTT (4)
| 34.5 | 0.0345 |
| P0.5 retina | CTATGTGGGC (2) GTTCCTAGGA (3) TCCTCCCCTC (3) TGGGGTTTGG TTGCAGTGCC TTGCATTGCT (4) TTTTTATTTT (4)
| 17.8 | 0.0178 |
| P2.5 retina | ACAAGACACA CTATGTGGGC (2) GCTTTTAAAA (3) GGGCGGGAAG (4) TGGGGTTGGC (2) TTCTCAATTA TTGCATTGCT (4) TTGGGTTTTT (4) TTTTTATTTT (4)
| 26.6 | 0.0266 |
| P4.5 retina | GGAAGGAGTG (4) GGAATAAACA (4) TTGCATTGCT (4) TTGGGTTTTT (4) TTTTTATTTT (4)
| 17.9 | 0.0179 |
| P6.5 retina | ACAAGACACA GCTCTGGAGA (3) GTTCCTAGGA (3) TGGGGTTTGG TTGCATTGCT (4) TTGGGTTTTT (4) TTTTTATTTT (4)
| 21.7 | 0.0217 |
| P10.5 crx- retina | ACAAGACACA GGAAGGAGTG (4) GTTCCTAGGA (3) TCCTCCCCTC (3) TGGGGTTGGC (2) TTGCATTGCT (4) TTGGGTTTTT (4) TTTTTATTTT (4)
| 31.7 | 0.0317 |
| P10.5 crx+ retina | ACAAGACACA GCTTTTAAAA (3) GGGCGGGAAG (4) TTGCATTGCT (4) TTGGGTTTTT (4) TTTTTATTTT (4)
| 17.2 | 0.0172 |
| Adult retinal | GTTCCTAGGA (3) TGGGGTTGGC (2) TTGCAGTGCC TTGGGTTTTT (4) TTTTTATTTT (4)
| 14.9 | 0.0149 |
| ONL | ACAAGACACA GGAAGGAGTG (4) GTTCCTAGGA (3) TTGGGTTTTT (4) TTTTTATTTT (4)
| 9.5 | 0.0095 |