Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.42733	Prm1	protamine 1	16	16 3.4 cM	19118
Gene Ontology	cell differentiation | chromosome | chromosome condensation | chromosome organization and biogenesis (sensu Eukarya) | cytoplasm | DNA binding | mitotic chromosome condensation | nuclear organization and biogenesis | nucleosome | nucleus | nucleus | spermatid development | spermatogenesis
Human Homolog	PRM1[protamine 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 58 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TCCCCCACAC (2) TTCTTTTTTA (3) TTTTTTTTTT (2) 11.4 0.0114 Cb medulloblastoma TTTTTTTTTT (2) 2.3 0.0023 P8 GC+1d culture TCCCCCACAC (2) TTTTTTTTTT (2) 19.4 0.0194 P8 GC+SHH+1d culture ACTAGTGCTT (4) TCCCCCACAC (2) TTCTTTTTTA (3) TTTTTTTTTT (2) 9.5 0.0095 3T3 fibroblasts CCACCTGTCA (2) GTCATAGCTG (2) TCCCCCACAC (2) 28 0.028 E15 cortex GCTGTGGCAA GTCATAGCTG (2) TTTTTTTTTT (2) 14.7 0.0147 P1 cortex TTTTTTTTTT (2) 4.5 0.0045 Hypothalamus GCCAGATACT (2) GCTGTGGCAA TCCCCCACAC (2) TTTTTTTTTT (2) 16.2 0.0162 E12.5 retina ACTAGTGCTT (4) TCCCCCACAC (2) TTTTTTTTTT (2) 22.5 0.0225 E14.5 retina TCCCCCACAC (2) TTTTTTTTTT (2) 40.1 0.0401 E16.5 retina TCCCCCACAC (2) TTTTTTTTTT (2) 10.8 0.0108 E18.5 retina TCCCCCACAC (2) TTTTTTTTTT (2) 14.5 0.0145 P0.5 retina GCCAGATACT (2) GTCATAGCTG (2) TCCCCCACAC (2) TTTTTTTTTT (2) 21.6 0.0216 P2.5 retina GCTGTGGCAA GTCATAGCTG (2) TCCCCCACAC (2) TTTTTTTTTT (2) 19.4 0.0194 P4.5 retina ACTAGTGCTT (4) GTCATAGCTG (2) TCCCCCACAC (2) TTTTTTTTTT (2) 23.8 0.0238 P6.5 retina GTCATAGCTG (2) TCCCCCACAC (2) TTTTTTTTTT (2) 31.6 0.0316 P10.5 crx- retina TCCCCCACAC (2) 11.1 0.0111 P10.5 crx+ retina GCCAGATACT (2) TCCCCCACAC (2) TTCTTTTTTA (3) TTTTTTTTTT (2) 26.8 0.0268 Adult retinal GCCAGATACT (2) GTCATAGCTG (2) TCCCCCACAC (2) TTCTTTTTTA (3) TTTTTTTTTT (2) 20.5 0.0205 ONL GCTGTGGCAA GTCATAGCTG (2) TTTTTTTTTT (2) 11.4 0.0114