| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | ATGACGAATC GCCATTAATT TAACCTATTA TGAAAAAAAA (2) TGCAATTTGT (3)
| 35.8 | 0.0358 |
| Cb medulloblastoma | ACTTTATATG GGCCATTTAA TGAAAAAAAA (2)
| 83.2 | 0.0832 |
| P8 GC+1d culture | GGCCATTTAA TAACCTATTA TGAAAAAAAA (2) TTCAAATGAC
| 31.9 | 0.0319 |
| P8 GC+SHH+1d culture | TAACCTATTA TGAAAAAAAA (2) TGCAATTTGT (3) TTCAAATGAC
| 63.2 | 0.0632 |
| 3T3 fibroblasts | TGAAAAAAAA (2)
| 7 | 0.007 |
| E15 cortex | AACTTTTTTT TGAAAAAAAA (2)
| 34.6 | 0.0346 |
| P1 cortex | AACTTTTTTT ACTTTATATG TAACCTATTA TGAAAAAAAA (2)
| 22.6 | 0.0226 |
| Hypothalamus | AACTTTTTTT ACTTTATATG GGCCATTTAA TAACCTATTA TGAAAAAAAA (2) TTCAAATGAC
| 48.8 | 0.0488 |
| E12.5 retina | ACATTATTTG ATGACGAATC TAACCTATTA TGAAAAAAAA (2) TTCAAATGAC
| 41.4 | 0.0414 |
| E14.5 retina | TGAAAAAAAA (2)
| 49.2 | 0.0492 |
| E16.5 retina | TGAAAAAAAA (2) TGCAATTTGT (3)
| 18.1 | 0.0181 |
| E18.5 retina | ACATTATTTG TGAAAAAAAA (2) TGCAATTTGT (3) TTCAAATGAC
| 80 | 0.08 |
| P0.5 retina | TAACCTATTA TGAAAAAAAA (2)
| 17.7 | 0.0177 |
| P2.5 retina | TAACCTATTA TGAAAAAAAA (2) TGCAATTTGT (3)
| 45.8 | 0.0458 |
| P4.5 retina | TGAAAAAAAA (2)
| 43.6 | 0.0436 |
| P6.5 retina | TGAAAAAAAA (2)
| 33.3 | 0.0333 |
| P10.5 crx- retina | TGAAAAAAAA (2)
| 9.3 | 0.0093 |
| P10.5 crx+ retina | ACATTATTTG GCCATTAATT TGAAAAAAAA (2)
| 23 | 0.023 |
| Adult retinal | TGAAAAAAAA (2)
| 13 | 0.013 |
| ONL | ATGACGAATC TAACCTATTA TGAAAAAAAA (2)
| 23 | 0.023 |