| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | CCTTTAATCC (3) TTGGAAAAAA (3) TTGGAGCTGG
| 68.5 | 0.0685 |
| Cb medulloblastoma | CCCGGCCAGA CCTTTAATCC (3) TTGGAGCTGG
| 48.5 | 0.0485 |
| P8 GC+1d culture | CCCGGCCAGA CCTTTAATCC (3) TTGGAAAAAA (3) TTGGAGCTGG
| 42.2 | 0.0422 |
| P8 GC+SHH+1d culture | CCCGGCCAGA CCTTTAATCC (3) TTGGAAAAAA (3) TTGGAGCTGG
| 36.4 | 0.0364 |
| 3T3 fibroblasts | CCTTTAATCC (3) TTGGAGCTGG
| 73.6 | 0.0736 |
| E15 cortex | CCCGGCCAGA CCTTTAATCC (3) TTGGAGCTGG
| 69.2 | 0.0692 |
| P1 cortex | CCTTTAATCC (3) TTGGAAAAAA (3) TTGGAGCTGG
| 163.5 | 0.1635 |
| Hypothalamus | CCTTTAATCC (3) TTGGAGCTGG
| 25.3 | 0.0253 |
| E12.5 retina | CCTTTAATCC (3) TTGGAAAAAA (3) TTGGAGCTGG
| 86.4 | 0.0864 |
| E14.5 retina | CCTTTAATCC (3) TTGGAGCTGG
| 122.1 | 0.1221 |
| E16.5 retina | CCTTTAATCC (3) TTGGAGCTGG
| 76 | 0.076 |
| E18.5 retina | CCTTTAATCC (3) TTGGAAAAAA (3) TTGGAGCTGG
| 40 | 0.04 |
| P0.5 retina | CCCGGCCAGA CCTTTAATCC (3) TTGGAGCTGG
| 76.6 | 0.0766 |
| P2.5 retina | CCTTTAATCC (3) TTGGAAAAAA (3) TTGGAGCTGG
| 84.5 | 0.0845 |
| P4.5 retina | CCTTTAATCC (3) TTGGAGCTGG
| 65.4 | 0.0654 |
| P6.5 retina | CCTTTAATCC (3) TTGGAAAAAA (3) TTGGAGCTGG
| 88.3 | 0.0883 |
| P10.5 crx- retina | CCTTTAATCC (3)
| 63.2 | 0.0632 |
| P10.5 crx+ retina | CCTTTAATCC (3) TTGGAGCTGG
| 40.3 | 0.0403 |
| Adult retinal | CCCGGCCAGA CCTTTAATCC (3) TTGGAAAAAA (3) TTGGAGCTGG
| 135.3 | 0.1353 |
| ONL | CCCGGCCAGA CCTTTAATCC (3) TTGGAAAAAA (3) TTGGAGCTGG
| 93.8 | 0.0938 |