Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.43871	Trim35	tripartite motif-containing 35	14	14 D1	66854
Gene Ontology	cytoplasm | induction of apoptosis
Human Homolog	TRIM35[tripartite motif-containing 35]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

Total 10 In Situ Hybridization Images

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SAGE Tags

Total 81 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAGGAAGAGA (2) TCAGTTGTGG (2) TTTGCTGTGT 27.7 0.0277 Cb medulloblastoma AAGGAAGAGA (2) 2.3 0.0023 P8 GC+1d culture AAGGAAGAGA (2) AGTCCTGTGT (2) GCATCCAAGG (2) GCGGGGAAGG TTCTTTCCAG TTTCTTTCAG TTTGCTGTGT 51.3 0.0513 P8 GC+SHH+1d culture AAGGAAGAGA (2) AGTCCTGTGT (2) CTGGAGACCT (2) TCAGTTGTGG (2) TGCACTTGTG TTCTTTCCAG TTTGCTGTGT 30.4 0.0304 3T3 fibroblasts AAGGAAGAGA (2) TTTGCTGTGT 31.5 0.0315 E15 cortex AAGGAAGAGA (2) GAAGCTCACA GCGGGGAAGG 24.6 0.0246 P1 cortex GCGGGGAAGG TTCTTTCCAG TTTGCTGTGT 13.5 0.0135 Hypothalamus AAGGAAGAGA (2) AGGAAAGATG (2) TTTCTTTCAG TTTGCTGTGT 12.6 0.0126 E12.5 retina AAGGAAGAGA (2) AGGAAAGATG (2) CTGGAGACCT (2) GAAGCTCACA GCATCCAAGG (2) TCAGTTGTGG (2) TTTGCTGTGT 35.8 0.0358 E14.5 retina AAGGAAGAGA (2) AGGAAAGATG (2) TCAGTTGTGG (2) TTTGCTGTGT 18.1 0.0181 E16.5 retina AAGGAAGAGA (2) CTGGAGACCT (2) GAAGCTCACA TCAGTTGTGG (2) TTCTTTCCAG TTTGCTGTGT 18 0.018 E18.5 retina TTCTTTCCAG TTTGCTGTGT 7.3 0.0073 P0.5 retina AAGGAAGAGA (2) AGTCCTGTGT (2) GAAGCTCACA TCAGTTGTGG (2) TTTGCTGTGT 27.6 0.0276 P2.5 retina AAGGAAGAGA (2) AGGAAAGATG (2) GCGGGGAAGG TCAGTTGTGG (2) TTTGCTGTGT 24.7 0.0247 P4.5 retina AAGGAAGAGA (2) AGTCCTGTGT (2) TTTGCTGTGT 19.8 0.0198 P6.5 retina AAGGAAGAGA (2) AGTCCTGTGT (2) TTTGCTGTGT 8.4 0.0084 P10.5 crx- retina AAGGAAGAGA (2) AGGAAAGATG (2) AGTCCTGTGT (2) TCAGTTGTGG (2) TTTCTTTCAG TTTGCTGTGT 31.7 0.0317 P10.5 crx+ retina TCAGTTGTGG (2) TTTGCTGTGT 13.5 0.0135 Adult retinal AAGGAAGAGA (2) GAAGCTCACA GCATCCAAGG (2) TCAGTTGTGG (2) TTCTTTCCAG TTTGCTGTGT 20.4 0.0204 ONL GCATCCAAGG (2) TGCACTTGTG 9.6 0.0096