Mouse Retina SAGE Library    [Home]    [Libraries]    [Images]
Gene:              Accession:    
e.g., Rho or Rhodopsin e.g., BG297543 batch search
Tag:        Cytoband (Mm):    
e.g., CCCAGTTCAC e.g., 6 E3
Unigene:        Cytoband (Hs):    
e.g., Mm.2965 batch search e.g., 3q21-q24

 UniGene  Symbol  Name  Chr  Cytoband  LocusLink 
 Mm.45645 2010015M23RikRIKEN cDNA 2010015M23 gene 11    72087 
 Mm.45645 5730507C05RikRIKEN cDNA 5730507C05 gene 11    70633 
 Mm.45645 Sfrs1splicing factor, arginine/serine-rich 1 (ASF/SF2) 11  11 49.0 cM  110809 
 Gene Ontology mRNA processing | mRNA splice site selection | mRNA splice site selection | nuclear mRNA splicing, via spliceosome | nucleic acid binding | nucleus | pre-mRNA splicing factor activity | protein targeting | RNA binding | RNA binding | spliceosome complex
 Human Homolog SFRS1[splicing factor, arginine/serine-rich 1 (splicing factor 2, alternate splicing factor)]
 Clusters 
   Neighbors    

No In Situ Hybridization images could be found.



SAGE Tags

Total 155 tags found with positive counts.

  all tags    reliable tags    sum by library with all tags    sum by library with reliable tags  
 Library  Tag (Other Genes)  Normalized Count  % in library 
P8 Cb GCAATCCTGGTA (3)
AGTCAATTAT (3)
CAAATTTCTT (3)
CGTGAGGCAG (3)
CTTTTGTAGG (3)
GAGCGGGATC (3)
GAGTGGATTC
GATCCCAAAT (4)
GCCCTCTGGG
GCGGCGGCGG (3)
GGGTGGGGGA (3)
GTTGTCCTTT (3)
TATATATTTG
164.50.1645
Cb medulloblastomaGAGCGGGATC (3)
GAGGCCAATG (3)
GAGTGGATTC
GATCCCAAAT (4)
GCCCTCTGGG
GCGGCGGCGG (3)
48.40.0484
P8 GC+1d cultureAATCCTGGTA (3)
CCCAGCTTAC (3)
GAGCGGGATC (3)
GAGGCCAATG (3)
GAGTGGATTC
GATCCCAAAT (4)
GCGGCGGCGG (3)
GTTGTCCTTT (3)
TCGCGGAAGG
173.50.1735
P8 GC+SHH+1d cultureATCCACTCCA
GAGCGGGATC (3)
GAGTGGATTC
GATCCCAAAT (4)
GCGGCGGCGG (3)
GGGTGGGGGA (3)
GTTGTCCTTT (3)
TCGCGGAAGG
208.50.2085
3T3 fibroblastsAGCCCAGCCA (2)
GAGTGGATTC
GCCCTCTGGG
GCGGCGGCGG (3)
GTCATAGCTG (2)
560.056
E15 cortexGAGCGGGATC (3)
GTCATAGCTG (2)
TGCTTCTGAT
79.10.0791
P1 cortexCAAATTTCTT (3)
GAGCGGGATC (3)
GGGTGGGGGA (3)
27.20.0272
HypothalamusCGTGAGGCAG (3)
GAGCGGGATC (3)
GAGGCCAATG (3)
GAGTGGATTC
GCGGCGGCGG (3)
GGGTGGGGGA (3)
GTTGTCCTTT (3)
TATATATTTG
65.20.0652
E12.5 retinaCTTTTGTAGG (3)
GAGCGGGATC (3)
GAGTGGATTC
GATCCCAAAT (4)
GCCCTCTGGG
GCGGCGGCGG (3)
GGGTGGGGGA (3)
TATATATTTG
60.10.0601
E14.5 retinaGAGCGGGATC (3)
GAGGCCAATG (3)
GAGTGGATTC
GATCCCAAAT (4)
GCGGCGGCGG (3)
TATATATTTG
45.50.0455
E16.5 retinaAGTCAATTAT (3)
ATCCACTCCA
CTTTTGTAGG (3)
GAGCGGGATC (3)
GAGTGGATTC
GATCCCAAAT (4)
GCGGCGGCGG (3)
TATATATTTG
54.20.0542
E18.5 retinaGAGCGGGATC (3)
GAGTGGATTC
GATCCCAAAT (4)
GCGGCGGCGG (3)
GGGTGGGGGA (3)
TATATATTTG
54.60.0546
P0.5 retinaAATCCTGGTA (3)
ACTCCAAGTG
CAAATTTCTT (3)
CCCAGCTTAC (3)
GAGCGGGATC (3)
GAGTGGATTC
GATCCCAAAT (4)
GCGGCGGCGG (3)
GTCATAGCTG (2)
GTTGTCCTTT (3)
TATATATTTG
68.80.0688
P2.5 retinaACTCCAAGTG
CAAATTTCTT (3)
GAGCGGGATC (3)
GAGTGGATTC
GATCCCAAAT (4)
GCGGCGGCGG (3)
GTCATAGCTG (2)
TATATATTTG
68.70.0687
P4.5 retinaACTCCAAGTG
ATCCACTCCA
GAGCGGGATC (3)
GAGGCCAATG (3)
GAGTGGATTC
GATCCCAAAT (4)
GCGGCGGCGG (3)
GGGTGGGGGA (3)
GTCATAGCTG (2)
GTTGTCCTTT (3)
TGCTTCTGAT
45.80.0458
P6.5 retinaACTCCAAGTG
GAGCGGGATC (3)
GAGTGGATTC
GATCCCAAAT (4)
GCGGCGGCGG (3)
GGGTGGGGGA (3)
GTCATAGCTG (2)
51.60.0516
P10.5 crx- retinaACTCCAAGTG
AGCCCAGCCA (2)
AGTCAATTAT (3)
GAGCGGGATC (3)
GAGTGGATTC
GATCCCAAAT (4)
GCCCTCTGGG
GCGGCGGCGG (3)
GGGTGGGGGA (3)
91.20.0912
P10.5 crx+ retinaACTCCAAGTG
AGCCCAGCCA (2)
CGTGAGGCAG (3)
GAGCGGGATC (3)
GAGTGGATTC
GATCCCAAAT (4)
GCGGCGGCGG (3)
GGGTGGGGGA (3)
90.30.0903
Adult retinalACTCCAAGTG
CGTGAGGCAG (3)
GAGCGGGATC (3)
GAGTGGATTC
GATCCCAAAT (4)
GCGGCGGCGG (3)
GGGTGGGGGA (3)
GTCATAGCTG (2)
TCGCGGAAGG
TGCTTCTGAT
66.90.0669
ONLACTCCAAGTG
AGCCCAGCCA (2)
CAAATTTCTT (3)
GAGCGGGATC (3)
GAGTGGATTC
GATCCCAAAT (4)
GCGGCGGCGG (3)
GTCATAGCTG (2)
420.042