| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | ACAAAAAAAA (2) GTAAATTGTT (2)
| 19.6 | 0.0196 |
| Cb medulloblastoma | ACAAAAAAAA (2) GTAAATTGTT (2)
| 37 | 0.037 |
| P8 GC+1d culture | ACAAAAAAAA (2) GATGGCACCA (3) GTAAATTGTT (2)
| 13.6 | 0.0136 |
| P8 GC+SHH+1d culture | ACAAAAAAAA (2)
| 14.1 | 0.0141 |
| 3T3 fibroblasts | CCTGCAACCC
| 42.1 | 0.0421 |
| E15 cortex | ACAAAAAAAA (2) CCTGCAACCC GATGGCACCA (3)
| 14.7 | 0.0147 |
| P1 cortex | AAGAAGACAG (4) ACAAAAAAAA (2)
| 9 | 0.009 |
| Hypothalamus | AAGAAGACAG (4) ACAAAAAAAA (2) GATGGCACCA (3) GTAAATTGTT (2)
| 16.3 | 0.0163 |
| E12.5 retina | ACAAAAAAAA (2) GTAAATTGTT (2)
| 5.7 | 0.0057 |
| E14.5 retina | ACAAAAAAAA (2) CCTGCAACCC
| 7.3 | 0.0073 |
| E16.5 retina | AAGAAGACAG (4) ACAAAAAAAA (2) GTAAATTGTT (2)
| 9 | 0.009 |
| E18.5 retina | ACAAAAAAAA (2) GTAAATTGTT (2)
| 18.2 | 0.0182 |
| P0.5 retina | ACAAAAAAAA (2)
| 5.9 | 0.0059 |
| P2.5 retina | ACAAAAAAAA (2)
| 5.3 | 0.0053 |
| P4.5 retina | ACAAAAAAAA (2) GTAAATTGTT (2)
| 9.9 | 0.0099 |
| P6.5 retina | ACAAAAAAAA (2)
| 1.7 | 0.0017 |
| P10.5 crx- retina | ACAAAAAAAA (2) GTAAATTGTT (2)
| 5.6 | 0.0056 |
| P10.5 crx+ retina | ACAAAAAAAA (2) GTAAATTGTT (2)
| 17.3 | 0.0173 |
| ONL | ACAAAAAAAA (2)
| 5.7 | 0.0057 |