| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | CCTGCTTCCT (2) TTTTTTTTTT (2)
| 6.5 | 0.0065 |
| Cb medulloblastoma | GCGGGGTCGC TTTACAAACC (2) TTTTTTTTTT (2)
| 9.2 | 0.0092 |
| P8 GC+1d culture | CCTGCTTCCT (2) GCGGGGTCGC TTTACAAACC (2) TTTTTTTTTT (2)
| 21.6 | 0.0216 |
| P8 GC+SHH+1d culture | GCGGGGTCGC TTTACAAACC (2) TTTTTTTTTT (2)
| 8.3 | 0.0083 |
| 3T3 fibroblasts | AGCTGCTGAG
| 7 | 0.007 |
| E15 cortex | AGCTGCTGAG CCTGCTTCCT (2) GCGGGGTCGC TTTTTTTTTT (2)
| 29.6 | 0.0296 |
| P1 cortex | CCTGCTTCCT (2) GCGGGGTCGC TTTTTTTTTT (2)
| 36.3 | 0.0363 |
| Hypothalamus | CCTGCTTCCT (2) GCGGGGTCGC GGGAGGGGAG TTTTTTTTTT (2)
| 38 | 0.038 |
| E12.5 retina | GGGAGGGGAG TTTTTTTTTT (2)
| 9.4 | 0.0094 |
| E14.5 retina | CCTGCTTCCT (2) GGGAGGGGAG TTTTTTTTTT (2)
| 34.6 | 0.0346 |
| E16.5 retina | GCGGGGTCGC TTTACAAACC (2) TTTTTTTTTT (2)
| 10.8 | 0.0108 |
| E18.5 retina | GCGGGGTCGC GGGAGGGGAG TTTTTTTTTT (2)
| 18.1 | 0.0181 |
| P0.5 retina | CCTGCTTCCT (2) GCGGGGTCGC TTTTTTTTTT (2)
| 13.8 | 0.0138 |
| P2.5 retina | GCGGGGTCGC GGGAGGGGAG TTTTTTTTTT (2)
| 10.6 | 0.0106 |
| P4.5 retina | GCGGGGTCGC GGGAGGGGAG TTTACAAACC (2) TTTTTTTTTT (2)
| 17.9 | 0.0179 |
| P6.5 retina | CCTGCTTCCT (2) GCGGGGTCGC GGGAGGGGAG TTTTTTTTTT (2)
| 21.6 | 0.0216 |
| P10.5 crx+ retina | TTTTTTTTTT (2)
| 3.8 | 0.0038 |
| Adult retinal | CCTGCTTCCT (2) GCGGGGTCGC GGGAGGGGAG TTTTTTTTTT (2)
| 39 | 0.039 |
| ONL | GCGGGGTCGC GGGAGGGGAG TTTTTTTTTT (2)
| 15.3 | 0.0153 |