| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | ATTCCGAATT (2) TTTTTTTTTT (2)
| 6.5 | 0.0065 |
| Cb medulloblastoma | GCCTGGGCTC (3) TTTTTTTTTT (2)
| 4.6 | 0.0046 |
| P8 GC+1d culture | CCCTGGCCTT (2) TTTTTTTTTT (2)
| 14.8 | 0.0148 |
| P8 GC+SHH+1d culture | GCCTGGGCTC (3) TTTTTTTTTT (2)
| 7.1 | 0.0071 |
| 3T3 fibroblasts | CCCTGGCCTT (2) GCCTGGGCTC (3)
| 10.5 | 0.0105 |
| E15 cortex | TTTTTTTTTT (2)
| 4.9 | 0.0049 |
| P1 cortex | TTTTTTTTTT (2)
| 4.5 | 0.0045 |
| Hypothalamus | CTGCGGGGGG GCCTGGGCTC (3) TTTTTTTTTT (2)
| 16.2 | 0.0162 |
| E12.5 retina | TTTTTTTTTT (2)
| 7.5 | 0.0075 |
| E14.5 retina | CTGCGGGGGG GCCTGGGCTC (3) TTTTTTTTTT (2)
| 27.3 | 0.0273 |
| E16.5 retina | GCCTGGGCTC (3) TTTTTTTTTT (2)
| 7.2 | 0.0072 |
| E18.5 retina | CTGCGGGGGG GCCTGGGCTC (3) TTTTTTTTTT (2)
| 16.3 | 0.0163 |
| P0.5 retina | TTTTTTTTTT (2)
| 9.8 | 0.0098 |
| P2.5 retina | GCCTGGGCTC (3) TTTTTTTTTT (2)
| 10.5 | 0.0105 |
| P4.5 retina | ATTCCGAATT (2) TTTTTTTTTT (2)
| 11.9 | 0.0119 |
| P6.5 retina | ATTCCGAATT (2) GCCTGGGCTC (3) TTTTTTTTTT (2)
| 13.3 | 0.0133 |
| P10.5 crx+ retina | GCCTGGGCTC (3) TTTTTTTTTT (2)
| 5.7 | 0.0057 |
| Adult retinal | GCCTGGGCTC (3) TTTTTTTTTT (2)
| 9.3 | 0.0093 |
| ONL | ATTCCGAATT (2) TTTTTTTTTT (2)
| 7.6 | 0.0076 |