Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.603	Snrpd1	small nuclear ribonucleoprotein D1	18		20641
Gene Ontology	mRNA processing | nuclear mRNA splicing, via spliceosome | nucleus | pre-mRNA splicing factor activity | ribonucleoprotein complex | RNA binding | small nucleolar ribonucleoprotein complex | spliceosome assembly | spliceosome complex
Human Homolog	SNRPD1[small nuclear ribonucleoprotein D1 polypeptide 16kDa]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 61 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AACACACACC GAGCTTTAGT GGTTTGATTT 11.4 0.0114 Cb medulloblastoma ACTCAATTTC GAGCTTTAGT GTTTGAATTT 6.9 0.0069 P8 GC+1d culture AACACACACC ACTCAATTTC GGTTTGATTT GTCCTGGAAA (4) GTTTGAATTT 6.7 0.0067 P8 GC+SHH+1d culture AACAGAGAAA ACTCAATTTC GGTTTGATTT GTTTGAATTT 4.8 0.0048 3T3 fibroblasts AACACACACC GTCATAGCTG (2) 17.5 0.0175 E15 cortex GGTTTGATTT GTCATAGCTG (2) 9.8 0.0098 P1 cortex GAGCTTTAGT 4.5 0.0045 Hypothalamus GAGCTTTAGT GGTTTGATTT 3.6 0.0036 E12.5 retina AACACACACC GAGCTTTAGT GGTTTGATTT 5.7 0.0057 E14.5 retina AACACACACC AACAGAGAAA GAGCTTTAGT 7.2 0.0072 E16.5 retina AACAGAGAAA ACTCAATTTC GAGCTTTAGT GTCCTGGAAA (4) GTTTGAATTT 10.8 0.0108 E18.5 retina AACAGAGAAA GAGCTTTAGT GGTTTGATTT 7.2 0.0072 P0.5 retina AACACACACC ACTCAATTTC GGTTTGATTT GTCATAGCTG (2) 13.8 0.0138 P2.5 retina AACACACACC GTCATAGCTG (2) 3.6 0.0036 P4.5 retina AACACACACC GGTTTGATTT GTCATAGCTG (2) 9.9 0.0099 P6.5 retina AACACACACC GAGCTTTAGT GGTTTGATTT GTCATAGCTG (2) 8.4 0.0084 P10.5 crx- retina AACACACACC 7.4 0.0074 P10.5 crx+ retina AACACACACC GAGCTTTAGT 3.8 0.0038 Adult retinal AACACACACC AACAGAGAAA GAGCTTTAGT GGTTTGATTT GTCATAGCTG (2) GTCCTGGAAA (4) 16.9 0.0169 ONL AACACACACC AACAGAGAAA GTCATAGCTG (2) 9.5 0.0095