Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.6306	Atp2a3	ATPase, Ca++ transporting, ubiquitous	11		53313
Gene Ontology	ATP binding | ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism | calcium ion binding | calcium ion transport | calcium-transporting ATPase activity | catalytic activity | cation transport | endoplasmic reticulum | hydrolase activity | hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances | integral to membrane | magnesium ion binding | membrane | metabolism
Human Homolog	ATP2A3[ATPase, Ca++ transporting, ubiquitous]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 47 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GAGGCCCAAG (3) GCCAGAGCAG (2) GCTGTCCTCA GGATGAAAAA 8.1 0.0081 Cb medulloblastoma CCACCCTGGC GAGGCCCAAG (3) GATGAAAAAA (4) GCCAGAGCAG (2) GCTGTCCTCA 18.4 0.0184 P8 GC+1d culture GAGGCCCAAG (3) GGATGAAAAA GGCTCTGCAT 8 0.008 P8 GC+SHH+1d culture CCACCCTGGC GAGGCCCAAG (3) GATGAAAAAA (4) GGCTCTGCAT 7.1 0.0071 3T3 fibroblasts GAGGCCCAAG (3) GCTGTCCTCA 10.5 0.0105 E15 cortex GAGGCCCAAG (3) 4.9 0.0049 P1 cortex CCACCCTGGC 4.5 0.0045 Hypothalamus CCACCCTGGC GAGGCCCAAG (3) GATGAAAAAA (4) GCTGTCCTCA 9 0.009 E12.5 retina GAGGCCCAAG (3) 1.9 0.0019 E14.5 retina GAGGCCCAAG (3) 3.6 0.0036 E16.5 retina CCACCCTGGC GCCAGAGCAG (2) 3.6 0.0036 E18.5 retina GGATGAAAAA 1.8 0.0018 P0.5 retina GAGGCCCAAG (3) GATGAAAAAA (4) GCTGTCCTCA 9.9 0.0099 P2.5 retina GAGGAGGGGC (3) GAGGCCCAAG (3) 3.6 0.0036 P4.5 retina GAGGCCCAAG (3) 2 0.002 P6.5 retina GAGGAGGGGC (3) GAGGCCCAAG (3) GGCTCTGCAT 13.4 0.0134 P10.5 crx- retina GAGGCCCAAG (3) 3.7 0.0037 P10.5 crx+ retina GAGGAGGGGC (3) GAGGCCCAAG (3) GCTGTCCTCA 15.3 0.0153 Adult retinal GAGGCCCAAG (3) GCCAGAGCAG (2) GCTGTCCTCA 11.2 0.0112 ONL GAGGCCCAAG (3) GGATGAAAAA 7.6 0.0076