Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.6343	Npm1	nucleophosmin 1	11		18148
Gene Ontology	nucleic acid binding | nucleolus | nucleus | protein binding | RNA binding
Human Homolog	NPM1[nucleophosmin (nucleolar phosphoprotein B23, numatrin)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 116 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GGAAAATACA GTGGTGCACG TCTGGAAAGC (3) TGAAATAAAA (3) TGAAATAAAC TTTTAACCTT (3) 79.8 0.0798 Cb medulloblastoma CAAGGGCAAA (5) GTGGTGCACG TGAAATAAAA (3) TGAAATAAAC 57.8 0.0578 P8 GC+1d culture CAAGGGCAAA (5) GTGGTGCACG TAAATAAACT (2) TCTGGAAAGC (3) TGAAATAAAA (3) TGAAATAAAC TTTTAACCTT (3) 49.1 0.0491 P8 GC+SHH+1d culture CAAGGGCAAA (5) GTGGTGCACG TAAATAAACT (2) TATATTTGTC TGAAATAAAC TTTTAACCTT (3) 88.9 0.0889 3T3 fibroblasts GTGGTGCACG TCTGGAAAGC (3) TGAAATAAAC TTTTAACCTT (3) 38.5 0.0385 E15 cortex CAAGGGCAAA (5) GTGGTGCACG TCTGGAAAGC (3) TGAAATAAAA (3) TGAAATAAAC 69.1 0.0691 P1 cortex GTGGTGCACG TGAAATAAAA (3) TGAAATAAAC TGAAATAAAT (2) 59 0.059 Hypothalamus GTGGTGCACG TATATTTGTC TGAAATAAAA (3) TGAAATAAAC TGAAATAAAT (2) TTTTAACCTT (3) 57.9 0.0579 E12.5 retina GTGGTGCACG TATATTTGTC TCTGGAAAGC (3) TGAAATAAAA (3) TGAAATAAAC TTTTAACCTT (3) 124 0.124 E14.5 retina CAAGGGCAAA (5) GGAAAATACA GTGGTGCACG TATATTTGTC TGAAATAAAA (3) TGAAATAAAC TTTTAACCTT (3) 98.4 0.0984 E16.5 retina CAAGGGCAAA (5) GTGGTGCACG TATATTTGTC TCTGGAAAGC (3) TGAAATAAAA (3) TGAAATAAAC TTTTAACCTT (3) 85.2 0.0852 E18.5 retina GGAAAATACA GTGGTGCACG TATATTTGTC TGAAATAAAA (3) TGAAATAAAC TTTTAACCTT (3) 156.5 0.1565 P0.5 retina CAAGGGCAAA (5) GTGGTGCACG TCTGGAAAGC (3) TGAAATAAAC TTTTAACCTT (3) 45.3 0.0453 P2.5 retina CAAGGGCAAA (5) GGAAAATACA GTGGTGCACG TATATTTGTC TGAAATAAAA (3) TGAAATAAAC TGAAATAAAT (2) TTTTAACCTT (3) 75.8 0.0758 P4.5 retina CAAGGGCAAA (5) GTGGTGCACG TATATTTGTC TGAAATAAAA (3) TGAAATAAAC TTTTAACCTT (3) 83.3 0.0833 P6.5 retina CAAGGGCAAA (5) GGAAAATACA GTGGTGCACG TGAAATAAAA (3) TGAAATAAAC TTTTAACCTT (3) 40.1 0.0401 P10.5 crx- retina CAAGGGCAAA (5) GTGGTGCACG TATATTTGTC TGAAATAAAA (3) TGAAATAAAC TTTTAACCTT (3) 27.9 0.0279 P10.5 crx+ retina GAAGCAAGCA GGAAAATACA GTGGTGCACG TGAAATAAAA (3) TGAAATAAAC TTTTAACCTT (3) 32.6 0.0326 Adult retinal GAAGCAAGCA GTGGTGCACG TCTGGAAAGC (3) TGAAATAAAA (3) TGAAATAAAC 26.1 0.0261 ONL CAAGGGCAAA (5) GAAGCAAGCA GTGGTGCACG TGAAATAAAA (3) TGAAATAAAC TGAAATAAAT (2) 34.4 0.0344